Gm32643 Gene Detail

Summary

• Symbol
  Gm32643
• Name
  predicted gene, 32643

• Feature Type
  lncRNA gene
• IDs
  MGI:5591802
  NCBI Gene: 102635257
• Alliance
  gene page
• Transcription Start Sites
  5 TSS

Location &
Maps

• Sequence Map
  Chr8:129173107-129219480 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  1035 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5591802	lncRNA gene	Chr8:129124309-129219480 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm32643
  

Expression

• cDNA Data
  2

• Other Mouse Links
  GEO

Sequences &
Gene Models

• All Sequences
  30
• RefSeq
  15

• Ensembl
  ENSMUSG00000137137 (Evidence)
• NCBI Gene
  102635257

Representative Sequences			Length	Strain/Species
genomic	102635257	NCBI Gene Model | MGI Sequence Detail	46374	C57BL/6J
transcript	AK050336	GenBank | ENA | DDBJ | MGI Sequence Detail	370	C57BL/6J

Molecular
Reagents

• All nucleic 2

  cDNA 2

References

• Summaries
  All 5
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:57747 MGI Genome Annotation Group and UniGene Staff, MGI-UniGene Interconnection Effort. Database Download. 2015;

TSS for Gm32643:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr83549	Chr8:129215056-129215073 (-)	4,415 bp
Tssr83548	Chr8:129215032-129215043 (-)	4,442 bp
Tssr83547	Chr8:129214980-129214996 (-)	4,492 bp
Tssr83546	Chr8:129214952-129214963 (-)	4,522 bp
Tssr83545	Chr8:129192784-129192788 (-)	26,694 bp