Gm32468 Gene Detail

Summary

• Symbol
  Gm32468
• Name
  predicted gene, 32468

• Feature Type
  lncRNA gene
• IDs
  MGI:5591627
  NCBI Gene: 102635028
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr10:92920098-92929388 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  325 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5591627	lncRNA gene	Chr10:92912827-92929589 (+)
129S1/SvImJ	ENSMUSG00200031141	lncRNA gene	Chr10:89425079-89434588 (+)
A/J	ENSMUSG00195023178	lncRNA gene	Chr10:89869340-89878920 (+)
AKR/J	ENSMUSG00220023432	lncRNA gene	Chr10:89436939-89446519 (+)
BALB/cJ	ENSMUSG00180036244	lncRNA gene	Chr10:89872100-89881681 (+)
C3H/HeJ	ENSMUSG00175023955	lncRNA gene	Chr10:89768087-89777666 (+)
C57BL/6NJ	ENSMUSG00215032577	lncRNA gene	Chr10:89447570-89457122 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005038140	lncRNA gene	Chr10:89148203-89157708 (+)
CBA/J	ENSMUSG00210037275	lncRNA gene	Chr10:89608081-89617660 (+)
DBA/2J	ENSMUSG00185044343	lncRNA gene	Chr10:89819745-89829325 (+)
FVB/NJ	ENSMUSG00205024652	lncRNA gene	Chr10:89523710-89533292 (+)
JF1/MsJ	ENSUMUG00000029782	lncRNA gene	Chr10:91228204-91237756 (+)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190019700	lncRNA gene	Chr10:89857339-89866919 (+)
NZO/HlLtJ	ENSMUSG00225022516	lncRNA gene	Chr10:95972483-95982059 (+)
PWK/PhJ	ENSLUMG00010024303	lncRNA gene	Chr10:89494614-89504138 (+)
SPRET/EiJ	ENSMSPG00010010594	lncRNA gene	Chr10:91112150-91121685 (+)
WSB/EiJ	ENSIUOG00005040032	lncRNA gene	Chr10:89558121-89567635 (+)

Homology

• Gene Tree
  Gm32468
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  6 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Transposon induced
  1
• Genomic Mutations
  2 involving Gm32468
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  35
• RefSeq
  2

• Ensembl
  ENSMUSG00000111013 (Evidence)
• NCBI Gene
  102635028

Representative Sequences			Length	Strain/Species
genomic	102635028	NCBI Gene Model | MGI Sequence Detail	9291	C57BL/6J
transcript	NR_168584	RefSeq | MGI Sequence Detail	809	ZRU/MplStud

References

• Summaries
  All 9

  Phenotypes 6
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:74548 Benson KF, et al., Molecular Characterization of the Mouse In(10)17Rk Inversion and Identification of a Novel Muscle-Specific Gene at the Proximal Breakpoint. Genetics. 2002 Jan;160(1):279-87

TSS for Gm32468:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr95239	Chr10:92920065-92920100 (+)	-15 bp