Gm32374 Gene Detail

Summary

• Symbol
  Gm32374
• Name
  predicted gene, 32374

• Feature Type
  lncRNA gene
• IDs
  MGI:5591533
  NCBI Gene: 102634899
• Alliance
  gene page
• Transcription Start Sites
  5 TSS

Location &
Maps

• Sequence Map
  Chr5:65149734-65177658 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  1050 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5591533	lncRNA gene	Chr5:65149734-65177658 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  17 phenotype references
  

• All Mutations and Alleles
  4
• Chemically induced (other)
  2
• Radiation induced
  1
• Spontaneous
  1
• Genomic Mutations
  4 involving Gm32374
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  4
• RefSeq
  2

• NCBI Gene
  102634899

Representative Sequences			Length	Strain/Species
genomic	102634899	NCBI Gene Model | MGI Sequence Detail	27925	C57BL/6J
transcript	XR_376982	RefSeq | MGI Sequence Detail	1874	C57BL/6J

References

• Summaries
  All 19

  Phenotypes 17
• Earliest
  J:5021 Batchelor AL, et al., A comparison of the mutagenic effectiveness of chronic neutron- and gamma-irradiation of mouse spermatogonia. Mutat Res. 1966 Jun;3(3):218-29
• Latest
  J:125425 Howell GR, et al., Mutation of a ubiquitously expressed mouse transmembrane protein (Tapt1) causes specific skeletal homeotic transformations. Genetics. 2007 Feb;175(2):699-707

TSS for Gm32374:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr51086	Chr5:65176603-65176619 (-)	1,047 bp
Tssr51085	Chr5:65176537-65176550 (-)	1,114 bp
Tssr1492	Chr5:65176514-65176521 (-)	1,140 bp
Tssr51084	Chr5:65176486-65176493 (-)	1,168 bp
Tssr51083	Chr5:65176460-65176463 (-)	1,196 bp