Gm32341 Gene Detail

Summary

• Symbol
  Gm32341
• Name
  predicted gene, 32341

• Feature Type
  lncRNA gene
• IDs
  MGI:5591500
  NCBI Gene: 102634857
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr19:16896907-16902372 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  354 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5591500	lncRNA gene	Chr19:16848456-16904767 (+)
129S1/SvImJ	ENSMUSG00200021236	lncRNA gene	Chr19:13544337-13600659 (+)
A/J	ENSMUSG00195018457	lncRNA gene	Chr19:13691150-13747481 (+)
AKR/J	ENSMUSG00220011168	lncRNA gene	Chr19:13678640-13732574 (+)
BALB/cJ	ENSMUSG00180019455	lncRNA gene	Chr19:14053441-14105608 (+)
C3H/HeJ	ENSMUSG00175003931	lncRNA gene	Chr19:13402193-13456072 (+)
C57BL/6NJ	ENSMUSG00215022660	lncRNA gene	Chr19:13454456-13508370 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005008944	lncRNA gene	Chr19:13294664-13349023 (+)
CBA/J	ENSMUSG00210012903	lncRNA gene	Chr19:13598784-13651748 (+)
DBA/2J	ENSMUSG00185013852	lncRNA gene	Chr19:14008250-14061231 (+)
FVB/NJ	ENSMUSG00205004206	lncRNA gene	Chr19:13464742-13521286 (+)
JF1/MsJ	ENSUMUG00000035414	lncRNA gene	Chr19:14244302-14297336 (+)
LP/J	ENSMUSG00230022346	lncRNA gene	Chr19:14912436-14968760 (+)
NOD/ShiLtJ	ENSMUSG00190020789	lncRNA gene	Chr19:13406375-13462379 (+)
NZO/HlLtJ	ENSMUSG00225047069	lncRNA gene	Chr19:18638424-18692337 (+)
PWK/PhJ	ENSLUMG00010008825	lncRNA gene	Chr19:13568824-13621768 (+)
SPRET/EiJ	ENSMSPG00010019694	lncRNA gene	Chr19:13553337-13607834 (+)
WSB/EiJ	ENSIUOG00005007530	lncRNA gene	Chr19:13123082-13175766 (+)

Homology

• Gene Tree
  Gm32341
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  2
• Gene trapped
  2
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  30
• RefSeq
  1

• Ensembl
  ENSMUSG00000118126 (Evidence)
• NCBI Gene
  102634857

Representative Sequences			Length	Strain/Species
genomic	102634857	NCBI Gene Model | MGI Sequence Detail	5466	C57BL/6J
transcript	XR_386578	RefSeq | MGI Sequence Detail	525	C57BL/6J

References

• Summaries
  All 5

  Phenotypes 2
• Earliest
  J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14

TSS for Gm32341:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr155413	Chr19:16897002-16897017 (+)	103 bp