Gm32196 Gene Detail

Summary

• Symbol
  Gm32196
• Name
  predicted gene, 32196

• Feature Type
  lncRNA gene
• IDs
  MGI:5591355
  NCBI Gene: 102634664
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr16:24963326-24996947 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  1048 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5591355	lncRNA gene	Chr16:24962464-24996947 (-)
129S1/SvImJ	ENSMUSG00200036141	lncRNA gene	Chr16:21968029-22001335 (-)
A/J	ENSMUSG00195029467	lncRNA gene	Chr16:21522633-21555923 (-)
AKR/J	ENSMUSG00220033870	lncRNA gene	Chr16:21842096-21875410 (-)
BALB/cJ	ENSMUSG00180030431	lncRNA gene	Chr16:21763240-21796535 (-)
C3H/HeJ	ENSMUSG00175040848	lncRNA gene	Chr16:21916740-21950053 (-)
C57BL/6NJ	ENSMUSG00215021874	lncRNA gene	Chr16:21635289-21668587 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005038394	lncRNA gene	Chr16:22243758-22276257 (-)
CBA/J	ENSMUSG00210039735	lncRNA gene	Chr16:21938310-21971619 (-)
DBA/2J	ENSMUSG00185020167	lncRNA gene	Chr16:21877147-21910460 (-)
FVB/NJ	ENSMUSG00205025148	lncRNA gene	Chr16:21869299-21902597 (-)
JF1/MsJ	ENSUMUG00000040862	lncRNA gene	Chr16:22118653-22151481 (-)
LP/J	ENSMUSG00230034335	lncRNA gene	Chr16:24447324-24480627 (-)
NOD/ShiLtJ	ENSMUSG00190034261	lncRNA gene	Chr16:22004927-22038223 (-)
NZO/HlLtJ	ENSMUSG00225039328	lncRNA gene	Chr16:27698545-27731860 (-)
PWK/PhJ	ENSLUMG00010035603	lncRNA gene	Chr16:21914943-21952655 (-)
SPRET/EiJ	ENSMSPG00010019994	lncRNA gene	Chr16:21829261-21862037 (-)
WSB/EiJ	ENSIUOG00005034529	lncRNA gene	Chr16:22130366-22163631 (-)

Homology

• Gene Tree
  Gm32196
  

Sequences &
Gene Models

• All Sequences
  25
• RefSeq
  2

• Ensembl
  ENSMUSG00000120156 (Evidence)
• NCBI Gene
  102634664

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000120156	Ensembl Gene Model | MGI Sequence Detail	33622	C57BL/6J
transcript	ENSMUST00000255202	Ensembl | MGI Sequence Detail	1026	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm32196:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr140611	Chr16:24996838-24996849 (-)	103 bp