Gm32171 Gene Detail

Summary

• Symbol
  Gm32171
• Name
  predicted gene, 32171

• Feature Type
  lncRNA gene
• IDs
  MGI:5591330
  NCBI Gene: 102634633
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr9:33165758-33173814 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  399 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5591330	lncRNA gene	Chr9:33062588-33220099 (+)
129S1/SvImJ	ENSMUSG00200008408	lncRNA gene	Chr9:30072329-30180026 (+)
A/J	ENSMUSG00195006661	lncRNA gene	Chr9:29863591-29971288 (+)
AKR/J	ENSMUSG00220010834	lncRNA gene	Chr9:29899292-30006986 (+)
BALB/cJ	ENSMUSG00180007168	lncRNA gene	Chr9:29991946-30099645 (+)
C3H/HeJ	ENSMUSG00175020201	lncRNA gene	Chr9:29993319-30101020 (+)
C57BL/6NJ	ENSMUSG00215007989	lncRNA gene	Chr9:29960712-30071952 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005019066	lncRNA gene	Chr9:29928254-30043609 (+)
CBA/J	ENSMUSG00210022121	lncRNA gene	Chr9:29990746-30094815 (+)
DBA/2J	ENSMUSG00185002610	lncRNA gene	Chr9:30040059-30141195 (+)
FVB/NJ	ENSMUSG00205004812	lncRNA gene	Chr9:30373298-30482872 (+)
JF1/MsJ	ENSUMUG00000015468	lncRNA gene	Chr9:30229228-30330638 (+)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190006431	lncRNA gene	Chr9:30083981-30191671 (+)
NZO/HlLtJ	ENSMUSG00225022305	lncRNA gene	Chr9:30461405-30562943 (+)
PWK/PhJ	ENSLUMG00010009498	lncRNA gene	Chr9:30078169-30184388 (+)
SPRET/EiJ	ENSMSPG00010038770	lncRNA gene	Chr9:30449718-30559855 (+)
WSB/EiJ	ENSIUOG00005015880	lncRNA gene	Chr9:29530155-29648274 (+)

Homology

• Gene Tree
  Gm32171
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  34
• RefSeq
  2

• Ensembl
  ENSMUSG00000111645 (Evidence)
• NCBI Gene
  102634633

Representative Sequences			Length	Strain/Species
genomic	102634633	NCBI Gene Model | MGI Sequence Detail	8057	C57BL/6J
transcript	XR_870616	RefSeq | MGI Sequence Detail	1139	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;