Gm32113 Gene Detail

Summary

• Symbol
  Gm32113
• Name
  predicted gene, 32113

• Feature Type
  lncRNA gene
• IDs
  MGI:5591272
  NCBI Gene: 102634564
• Alliance
  genome feature page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  ChrX:139284326-139286643 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  121 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5591272	lncRNA gene	ChrX:139194549-139286643 (-)
129S1/SvImJ	ENSMUSG00200047634	lncRNA gene	ChrX:118288340-118290657 (-)
A/J	ENSMUSG00195048346	lncRNA gene	ChrX:122147366-122149683 (-)
AKR/J	ENSMUSG00220038248	lncRNA gene	ChrX:115599269-115601586 (-)
BALB/cJ	ENSMUSG00180039311	lncRNA gene	ChrX:118580093-118582410 (-)
C3H/HeJ	ENSMUSG00175035124	lncRNA gene	ChrX:122448538-122450855 (-)
C57BL/6NJ	ENSMUSG00215044930	lncRNA gene	ChrX:118992685-118995002 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005040860	lncRNA gene	ChrX:119648867-119651186 (-)
CBA/J	ENSMUSG00210043478	lncRNA gene	ChrX:119376200-119378517 (-)
DBA/2J	ENSMUSG00185033513	lncRNA gene	ChrX:133267120-133269437 (-)
FVB/NJ	ENSMUSG00205036855	lncRNA gene	ChrX:117774469-117776786 (-)
JF1/MsJ	ENSUMUG00000032085	lncRNA gene	ChrX:152528387-152530705 (-)
LP/J	ENSMUSG00230039866	lncRNA gene	ChrX:139889270-139891587 (-)
NOD/ShiLtJ	ENSMUSG00190041943	lncRNA gene	ChrX:118784050-118786367 (-)
NZO/HlLtJ	ENSMUSG00225042762	lncRNA gene	ChrX:144586746-144589063 (-)
PWK/PhJ	ENSLUMG00010043678	lncRNA gene	ChrX:117274768-117277084 (-)
SPRET/EiJ	ENSMSPG00010039979	lncRNA gene	ChrX:121856698-121859030 (-)
WSB/EiJ	ENSIUOG00005039838	lncRNA gene	ChrX:119453625-119455942 (-)

Homology

• Gene Tree
  Gm32113
  

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  2

• Ensembl
  ENSMUSG00000120773 (Evidence)
• NCBI Gene
  102634564

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000120773	Ensembl Gene Model | MGI Sequence Detail	2318	C57BL/6J
transcript	ENSMUST00000245739	Ensembl | MGI Sequence Detail	1948	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm32113:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr164235	ChrX:139286607-139286619 (-)	30 bp
Tssr164234	ChrX:139285453-139285455 (-)	1,189 bp