Gm32031 Gene Detail

Summary

• Symbol
  Gm32031
• Name
  predicted gene, 32031
• Synonyms
  Gm45109

• Feature Type
  lncRNA gene
• IDs
  MGI:5591190
  NCBI Gene: 102634450
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr7:46658302-46658756 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  108 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5591190	lncRNA gene	Chr7:46657706-46659903 (+)
129S1/SvImJ	ENSMUSG00200032640	lncRNA gene	Chr7:34275614-34277109 (+)
A/J	ENSMUSG00195049222	lncRNA gene	Chr7:38291989-38293484 (+)
AKR/J	ENSMUSG00220009103	lncRNA gene	Chr7:32587353-32588854 (+)
BALB/cJ	ENSMUSG00180043818	lncRNA gene	Chr7:35167370-35168865 (+)
C3H/HeJ	ENSMUSG00175040393	lncRNA gene	Chr7:35711524-35713020 (+)
C57BL/6NJ	ENSMUSG00215046217	lncRNA gene	Chr7:34951007-34952502 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005048061	lncRNA gene	Chr7:38695586-38697029 (+)
CBA/J	ENSMUSG00210050385	lncRNA gene	Chr7:36061906-36063406 (+)
DBA/2J	ENSMUSG00185050318	lncRNA gene	Chr7:39958363-39959858 (+)
FVB/NJ	ENSMUSG00205048062	lncRNA gene	Chr7:35606517-35608013 (+)
JF1/MsJ	ENSUMUG00000055245	lncRNA gene	Chr7:44443105-44444550 (+)
LP/J	ENSMUSG00230051838	lncRNA gene	Chr7:45383021-45384517 (+)
NOD/ShiLtJ	ENSMUSG00190050353	lncRNA gene	Chr7:35934134-35935629 (+)
NZO/HlLtJ	ENSMUSG00225018639	lncRNA gene	Chr7:43585891-43587386 (+)
PWK/PhJ	ENSLUMG00010049467	lncRNA gene	Chr7:34904913-34906358 (+)
SPRET/EiJ	ENSMSPG00010045220	lncRNA gene	Chr7:34693692-34695160 (+)
WSB/EiJ	ENSIUOG00005031244	lncRNA gene	Chr7:36488997-36490482 (+)

Homology

• Gene Tree
  Gm32031
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  38
• RefSeq
  1

• Ensembl
  ENSMUSG00000109118 (Evidence)
• NCBI Gene
  102634450

Representative Sequences			Length	Strain/Species
genomic	102634450	NCBI Gene Model | MGI Sequence Detail	455	C57BL/6J
transcript	NR_166573	RefSeq | MGI Sequence Detail	325	ZRU/MplStud

Other
Accession IDs

MGI:5753685

References

• Summaries
  All 5
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;

TSS for Gm32031:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr66741	Chr7:46658290-46658314 (+)	0 bp