Gm31974 Gene Detail

Summary

• Symbol
  Gm31974
• Name
  predicted gene, 31974

• Feature Type
  lncRNA gene
• IDs
  MGI:5591133
  NCBI Gene: 102634378
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr1:134010194-134012348 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  138 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5591133	lncRNA gene	Chr1:134005131-134012501 (+)
129S1/SvImJ	ENSMUSG00200009138	lncRNA gene	Chr1:131614395-131615720 (+)
A/J	ENSMUSG00195045549	lncRNA gene	Chr1:130689661-130690986 (+)
AKR/J	ENSMUSG00220050902	lncRNA gene	Chr1:130559052-130560377 (+)
BALB/cJ	ENSMUSG00180039092	lncRNA gene	Chr1:131237775-131239100 (+)
C3H/HeJ	ENSMUSG00175048008	lncRNA gene	Chr1:130933948-130935273 (+)
C57BL/6NJ	ENSMUSG00215045877	lncRNA gene	Chr1:130939432-130940757 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005038925	lncRNA gene	Chr1:129851926-129853251 (+)
CBA/J	ENSMUSG00210028173	lncRNA gene	Chr1:130854506-130855831 (+)
DBA/2J	ENSMUSG00185035355	lncRNA gene	Chr1:135225824-135227149 (+)
FVB/NJ	ENSMUSG00205045903	lncRNA gene	Chr1:130191090-130192415 (+)
JF1/MsJ	ENSUMUG00000052901	lncRNA gene	Chr1:134374996-134376322 (+)
LP/J	ENSMUSG00230039459	lncRNA gene	Chr1:134772674-134773999 (+)
NOD/ShiLtJ	ENSMUSG00190047009	lncRNA gene	Chr1:130868672-130869997 (+)
NZO/HlLtJ	ENSMUSG00225021808	lncRNA gene	Chr1:138525939-138527264 (+)
PWK/PhJ	ENSLUMG00010029738	lncRNA gene	Chr1:130005341-130006667 (+)
SPRET/EiJ	ENSMSPG00010046029	lncRNA gene	Chr1:132804450-132805775 (+)
WSB/EiJ	ENSIUOG00005048046	lncRNA gene	Chr1:130608147-130609472 (+)

Homology

• Gene Tree
  Gm31974
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  2
• Radiation induced
  1
• Genomic Mutations
  3 involving Gm31974
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  30
• RefSeq
  2

• Ensembl
  ENSMUSG00000121237 (Evidence)
• NCBI Gene
  102634378

Representative Sequences			Length	Strain/Species
genomic	102634378	NCBI Gene Model | MGI Sequence Detail	2155	C57BL/6J
transcript	XR_878547	RefSeq | MGI Sequence Detail	1202	C57BL/6J

References

• Summaries
  All 7

  Phenotypes 4
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:7938 Juriloff DM, et al., Genetic and developmental studies of a new mouse mutation that produces otocephaly. J Craniofac Genet Dev Biol. 1985;5(2):121-45

TSS for Gm31974:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr8853	Chr1:134010991-134011015 (+)	809 bp