Gm31941 Pseudogene Detail

Summary

• Symbol
  Gm31941
• Name
  predicted gene, 31941

• Feature Type
  pseudogene
• IDs
  MGI:5591100
  NCBI Gene: 115486522
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr7:46625114-46625463 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  126 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5591100	pseudogene	Chr7:46623476-46625500 (+)
129S1/SvImJ	ENSMUSG00200032687	pseudogene	Chr7:34242891-34243240 (+)
A/J	ENSMUSG00195049260	pseudogene	Chr7:38259268-38259617 (+)
AKR/J	ENSMUSG00220009112	pseudogene	Chr7:32554633-32554982 (+)
BALB/cJ	ENSMUSG00180043849	pseudogene	Chr7:35134654-35135003 (+)
C3H/HeJ	ENSMUSG00175040476	pseudogene	Chr7:35678803-35679152 (+)
C57BL/6NJ	ENSMUSG00215046235	pseudogene	Chr7:34918285-34918634 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005048082	pseudogene	Chr7:38662932-38663281 (+)
CBA/J	ENSMUSG00210050389	pseudogene	Chr7:36029187-36029536 (+)
DBA/2J	ENSMUSG00185050350	pseudogene	Chr7:39925644-39925993 (+)
FVB/NJ	ENSMUSG00205048093	pseudogene	Chr7:35573794-35574143 (+)
JF1/MsJ	ENSUMUG00000055278	pseudogene	Chr7:44410525-44410874 (+)
LP/J	ENSMUSG00230051813	pseudogene	Chr7:45350308-45350657 (+)
NOD/ShiLtJ	ENSMUSG00190050389	pseudogene	Chr7:35901423-35901772 (+)
NZO/HlLtJ	ENSMUSG00225018337	pseudogene	Chr7:43553172-43553521 (+)
PWK/PhJ	ENSLUMG00010049494	pseudogene	Chr7:34872085-34872434 (+)
SPRET/EiJ	ENSMSPG00010045250	pseudogene	Chr7:34654873-34655201 (+)
WSB/EiJ	ENSIUOG00005031272	pseudogene	Chr7:36456147-36456496 (+)

Homology

• Gene Tree
  Gm31941
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000109637 (Evidence)
• NCBI Gene
  115486522

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000109637	Ensembl Gene Model | MGI Sequence Detail	350	C57BL/6J
transcript	ENSMUST00000209689	Ensembl | MGI Sequence Detail	350	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;