Gm31938 Gene Detail

Summary

• Symbol
  Gm31938
• Name
  predicted gene, 31938

• Feature Type
  lncRNA gene
• IDs
  MGI:5591097
  NCBI Gene: 102634330
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:4574113-4579122 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  175 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5591097	lncRNA gene	Chr12:4574102-4592886 (+)
129S1/SvImJ	ENSMUSG00200023897	lncRNA gene	Chr12:1534105-1539115 (+)
A/J	ENSMUSG00195017761	lncRNA gene	Chr12:1561797-1566808 (+)
AKR/J	ENSMUSG00220030217	lncRNA gene	Chr12:1559360-1564370 (+)
BALB/cJ	ENSMUSG00180015316	lncRNA gene	Chr12:1558260-1563273 (+)
C3H/HeJ	ENSMUSG00175009936	lncRNA gene	Chr12:1543364-1548371 (+)
C57BL/6NJ	ENSMUSG00215024746	lncRNA gene	Chr12:1488904-1493915 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005023378	lncRNA gene	Chr12:1371612-1376628 (+)
CBA/J	ENSMUSG00210013580	lncRNA gene	Chr12:1563078-1568086 (+)
DBA/2J	ENSMUSG00185022020	lncRNA gene	Chr12:1541058-1546067 (+)
FVB/NJ	ENSMUSG00205003389	lncRNA gene	Chr12:1338738-1343749 (+)
JF1/MsJ	ENSUMUG00000035188	lncRNA gene	Chr12:1540656-1545648 (+)
LP/J	ENSMUSG00230012243	lncRNA gene	Chr12:3369138-3374147 (+)
NOD/ShiLtJ	ENSMUSG00190008066	lncRNA gene	Chr12:2780817-2785826 (+)
NZO/HlLtJ	ENSMUSG00225019374	lncRNA gene	Chr12:5429196-5434221 (+)
PWK/PhJ	ENSLUMG00010017541	lncRNA gene	Chr12:1358972-1363979 (+)
SPRET/EiJ	ENSMSPG00010005312	lncRNA gene	Chr12:1752894-1757911 (+)
WSB/EiJ	ENSIUOG00005002372	lncRNA gene	Chr12:1544878-1549879 (+)

Homology

• Gene Tree
  Gm31938
  

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  31
• RefSeq
  1

• Ensembl
  ENSMUSG00000112422 (Evidence)
• NCBI Gene
  102634330

Representative Sequences			Length	Strain/Species
genomic	102634330	NCBI Gene Model | MGI Sequence Detail	5010	C57BL/6J
transcript	NR_136891	RefSeq | MGI Sequence Detail	1818	ZRU/MplStud

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 4
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;