Gm31933 Gene Detail

Summary

• Symbol
  Gm31933
• Name
  predicted gene, 31933

• Feature Type
  lncRNA gene
• IDs
  MGI:5591092
  NCBI Gene: 102634325
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr18:76704981-76720565 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  712 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5591092	lncRNA gene	Chr18:76699036-76720793 (-)
129S1/SvImJ	ENSMUSG00200029705	lncRNA gene	Chr18:73924731-73940313 (-)
A/J	ENSMUSG00195004935	lncRNA gene	Chr18:73990868-74006452 (-)
AKR/J	ENSMUSG00220017664	lncRNA gene	Chr18:73932607-73948183 (-)
BALB/cJ	ENSMUSG00180013666	lncRNA gene	Chr18:74561358-74576946 (-)
C3H/HeJ	ENSMUSG00175012953	lncRNA gene	Chr18:74122371-74137973 (-)
C57BL/6NJ	ENSMUSG00215026401	lncRNA gene	Chr18:73469616-73485198 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005030297	lncRNA gene	Chr18:73017506-73033006 (-)
CBA/J	ENSMUSG00210038030	lncRNA gene	Chr18:74079736-74095334 (-)
DBA/2J	ENSMUSG00185011823	lncRNA gene	Chr18:73985995-74001594 (-)
FVB/NJ	ENSMUSG00205017907	lncRNA gene	Chr18:73596484-73619434 (-)
JF1/MsJ	ENSUMUG00000038866	lncRNA gene	Chr18:73888146-73904626 (-)
LP/J	ENSMUSG00230014429	lncRNA gene	Chr18:76040808-76056390 (-)
NOD/ShiLtJ	ENSMUSG00190022730	lncRNA gene	Chr18:73733737-73749325 (-)
NZO/HlLtJ	ENSMUSG00225035025	lncRNA gene	Chr18:75898187-75921123 (-)
PWK/PhJ	ENSLUMG00010007078	lncRNA gene	Chr18:74298072-74313574 (-)
SPRET/EiJ	ENSMSPG00010009692	lncRNA gene	Chr18:74571037-74586713 (-)
WSB/EiJ	ENSIUOG00005008365	lncRNA gene	Chr18:73514831-73529864 (-)

Homology

• Gene Tree
  Gm31933
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Transposon induced
  1
• Genomic Mutations
  1 involving Gm31933
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  37
• RefSeq
  1

• Ensembl
  ENSMUSG00000117960 (Evidence)
• NCBI Gene
  102634325

Representative Sequences			Length	Strain/Species
genomic	102634325	NCBI Gene Model | MGI Sequence Detail	15585	C57BL/6J
transcript	NR_166695	RefSeq | MGI Sequence Detail	1884	ZRU/MplStud

References

• Summaries
  All 4

  Phenotypes 1
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:175597 Overbeek PA, Direct Data Submission for Overbeek Lentiviral Transgenic Lines. MGI Direct Data Submission. 2011;

TSS for Gm31933:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr153933	Chr18:76720560-76720570 (-)	0 bp