Gm31861 Pseudogene Detail

Summary

• Symbol
  Gm31861
• Name
  predicted gene, 31861

• Feature Type
  pseudogene
• IDs
  MGI:5591020
  NCBI Gene: 115490333
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr6:82219155-82219826 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  241 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5591020	pseudogene	Chr6:82219155-82219826 (+)
129S1/SvImJ	ENSMUSG00200012601	pseudogene	Chr6:79182454-79183125 (+)
A/J	ENSMUSG00195012537	pseudogene	Chr6:78869150-78869821 (+)
AKR/J	ENSMUSG00220001998	pseudogene	Chr6:77813327-77813998 (+)
BALB/cJ	ENSMUSG00180010307	pseudogene	Chr6:79245287-79245958 (+)
C3H/HeJ	ENSMUSG00175038923	pseudogene	Chr6:98168389-98169060 (-)
C57BL/6NJ	ENSMUSG00215017506	pseudogene	Chr6:79238439-79239110 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011958	pseudogene	Chr6:78420061-78420680 (+)
CAST/EiJ	ENSTCUG00005008470	pseudogene	Chr6:79251265-79251936 (+)
CBA/J	ENSMUSG00210011692	pseudogene	Chr6:79050967-79051638 (+)
DBA/2J	ENSMUSG00185000968	pseudogene	Chr6:79603892-79604563 (+)
FVB/NJ	ENSMUSG00205026398	pseudogene	Chr6:78286968-78287639 (+)
JF1/MsJ	ENSUMUG00000022904	pseudogene	Chr6:78640379-78641050 (+)
LP/J	ENSMUSG00230007651	pseudogene	Chr6:80739856-80740527 (+)
NOD/ShiLtJ	ENSMUSG00190002162	pseudogene	Chr6:78690262-78690933 (+)
NZO/HlLtJ	ENSMUSG00225020727	pseudogene	Chr6:82637426-82638097 (+)
PWK/PhJ	ENSLUMG00010006539	pseudogene	Chr6:78016367-78017038 (+)
SPRET/EiJ	ENSMSPG00010000409	pseudogene	Chr6:80165836-80166511 (+)
WSB/EiJ	ENSIUOG00005019728	pseudogene	Chr6:79611661-79612332 (+)

Homology

• Gene Tree
  Gm31861
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Endonuclease-mediated
  1
• Genomic Mutations
  1 involving Gm31861
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000108224 (Evidence)
• NCBI Gene
  115490333

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000108224	Ensembl Gene Model | MGI Sequence Detail	672	C57BL/6J
transcript	ENSMUST00000204563	Ensembl | MGI Sequence Detail	672	Not Applicable

References

• Summaries
  All 5

  Phenotypes 1
• Earliest
  J:235276 Saito M, et al., Identification of Stmm3 locus conferring resistance to late-stage chemically induced skin papillomas on mouse chromosome 4 by congenic mapping and allele-specific alteration analysis. Exp Anim. 2014;63(3):339-48