Gm31774 Gene Detail

Summary

• Symbol
  Gm31774
• Name
  predicted gene, 31774
• Synonyms
  Gm45775

• Feature Type
  lncRNA gene
• IDs
  MGI:5590933
  NCBI Gene: 102634113
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr8:118469214-118475218 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  259 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5590933	lncRNA gene	Chr8:118468841-118475218 (-)
129S1/SvImJ	ENSMUSG00200043370	lncRNA gene	Chr8:112810716-112812649 (-)
A/J	ENSMUSG00195028055	lncRNA gene	Chr8:113095431-113097366 (-)
AKR/J	ENSMUSG00220044216	lncRNA gene	Chr8:113285874-113287809 (-)
BALB/cJ	ENSMUSG00180029894	lncRNA gene	Chr8:113141357-113143294 (-)
C3H/HeJ	ENSMUSG00175032657	lncRNA gene	Chr8:113197988-113199919 (-)
C57BL/6NJ	ENSMUSG00215037625	lncRNA gene	Chr8:112771678-112773612 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005037004	lncRNA gene	Chr8:112512526-112514425 (-)
CBA/J	ENSMUSG00210037467	lncRNA gene	Chr8:113125367-113127299 (-)
DBA/2J	ENSMUSG00185019039	lncRNA gene	Chr8:119223993-119225926 (-)
FVB/NJ	ENSMUSG00205027493	lncRNA gene	Chr8:112107167-112109087 (-)
JF1/MsJ	ENSUMUG00000038756	lncRNA gene	Chr8:121530410-121532340 (-)
LP/J	ENSMUSG00230031640	lncRNA gene	Chr8:122864336-122866268 (-)
NOD/ShiLtJ	ENSMUSG00190021481	lncRNA gene	Chr8:113241381-113243314 (-)
NZO/HlLtJ	ENSMUSG00225043713	lncRNA gene	Chr8:126230113-126232045 (-)
PWK/PhJ	ENSLUMG00010040916	lncRNA gene	Chr8:112953338-112955253 (-)
SPRET/EiJ	ENSMSPG00010042032	lncRNA gene	Chr8:115150668-115152619 (-)
WSB/EiJ	ENSIUOG00005031080	lncRNA gene	Chr8:113990880-113992797 (-)

Homology

• Gene Tree
  Gm31774
  

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  26
• RefSeq
  3

• Ensembl
  ENSMUSG00000110494 (Evidence)
• NCBI Gene
  102634113

Representative Sequences			Length	Strain/Species
genomic	102634113	NCBI Gene Model | MGI Sequence Detail	6005	C57BL/6J
transcript	AK143772	GenBank | ENA | DDBJ | MGI Sequence Detail	1366	C57BL/6J

Molecular
Reagents

• All nucleic 1

  cDNA 1

Other
Accession IDs

MGI:5804890

References

• Summaries
  All 6
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;

TSS for Gm31774:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr83110	Chr8:118474992-118475001 (-)	221 bp