Gm31763 Gene Detail

Summary

• Symbol
  Gm31763
• Name
  predicted gene, 31763

• Feature Type
  lncRNA gene
• IDs
  MGI:5590922
  NCBI Gene: 102634101
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr10:66840854-66877105 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  1132 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5590922	lncRNA gene	Chr10:66840167-66891514 (+)
129S1/SvImJ	ENSMUSG00200017828	lncRNA gene	Chr10:63537126-63573442 (+)
A/J	ENSMUSG00195005748	lncRNA gene	Chr10:63831351-63867643 (+)
AKR/J	ENSMUSG00220029039	lncRNA gene	Chr10:63500174-63536485 (+)
BALB/cJ	ENSMUSG00180007814	lncRNA gene	Chr10:63865900-63902205 (+)
C3H/HeJ	ENSMUSG00175013314	lncRNA gene	Chr10:63700546-63736853 (+)
C57BL/6NJ	ENSMUSG00215003985	lncRNA gene	Chr10:63475438-63511744 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005027610	lncRNA gene	Chr10:63433521-63470837 (+)
CBA/J	ENSMUSG00210010004	lncRNA gene	Chr10:63580336-63616638 (+)
DBA/2J	ENSMUSG00185020372	lncRNA gene	Chr10:63943136-63979452 (+)
FVB/NJ	ENSMUSG00205007574	lncRNA gene	Chr10:63646707-63683261 (+)
JF1/MsJ	ENSUMUG00000022986	lncRNA gene	Chr10:65141281-65177605 (+)
LP/J	ENSMUSG00230019995	lncRNA gene	Chr10:65709062-65745854 (+)
NOD/ShiLtJ	ENSMUSG00190008254	lncRNA gene	Chr10:63941144-63977691 (+)
NZO/HlLtJ	ENSMUSG00225045254	lncRNA gene	Chr10:69997847-70034139 (+)
PWK/PhJ	ENSLUMG00010008201	lncRNA gene	Chr10:63539773-63576056 (+)
SPRET/EiJ	ENSMSPG00010023626	lncRNA gene	Chr10:65186216-65222307 (+)
WSB/EiJ	ENSIUOG00005033694	lncRNA gene	Chr10:63467087-63503879 (+)

Homology

• Gene Tree
  Gm31763
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  9 phenotype references
  

• All Mutations and Alleles
  41
• Chemically induced (other)
  1
• Gene trapped
  39
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm31763
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  2

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  32
• RefSeq
  1

• Ensembl
  ENSMUSG00000112925 (Evidence)
• NCBI Gene
  102634101

Representative Sequences			Length	Strain/Species
genomic	102634101	NCBI Gene Model | MGI Sequence Detail	36252	C57BL/6J
transcript	NR_110511	RefSeq | MGI Sequence Detail	1025	ZRU/MplStud

Molecular
Reagents

• All nucleic 2

  cDNA 2

References

• Summaries
  All 14

  Phenotypes 9
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
• Latest
  J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9

TSS for Gm31763:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr93795	Chr10:66840865-66840872 (+)	15 bp