Gm31747 Gene Detail

Summary

• Symbol
  Gm31747
• Name
  predicted gene, 31747

• Feature Type
  lncRNA gene
• IDs
  MGI:5590906
  NCBI Gene: 102634075
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr6:73563092-73585656 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  882 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5590906	lncRNA gene	Chr6:73563092-73585660 (-)
129S1/SvImJ	ENSMUSG00200013329	lncRNA gene	Chr6:70453130-70475698 (-)
A/J	ENSMUSG00195048305	lncRNA gene	Chr6:70165655-70188217 (-)
AKR/J	ENSMUSG00220047056	lncRNA gene	Chr6:69202919-69225495 (-)
BALB/cJ	ENSMUSG00180040967	lncRNA gene	Chr6:70565024-70587598 (-)
C3H/HeJ	ENSMUSG00175014283	lncRNA gene	Chr6:106849918-106872489 (+)
C57BL/6NJ	ENSMUSG00215043239	lncRNA gene	Chr6:70562714-70585281 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0006368	lincRNA gene	Chr6:70413700-70434973 (-)
CAST/EiJ	ENSTCUG00005037742	lncRNA gene	Chr6:70670713-70695404 (-)
CBA/J	ENSMUSG00210046918	lncRNA gene	Chr6:70372244-70394817 (-)
DBA/2J	ENSMUSG00185001027	lncRNA gene	Chr6:70928738-70951307 (-)
FVB/NJ	ENSMUSG00205038086	lncRNA gene	Chr6:69653474-69676043 (-)
JF1/MsJ	ENSUMUG00000043507	lncRNA gene	Chr6:69978039-70001229 (-)
LP/J	ENSMUSG00230008004	lncRNA gene	Chr6:72032535-72055103 (-)
NOD/ShiLtJ	ENSMUSG00190042847	lncRNA gene	Chr6:69916936-69940120 (-)
NZO/HlLtJ	ENSMUSG00225007038	lncRNA gene	Chr6:74004977-74027545 (-)
PWK/PhJ	ENSLUMG00010023081	lncRNA gene	Chr6:69396309-69419494 (-)
SPRET/EiJ	ENSMSPG00010000393	lncRNA gene	Chr6:71239571-71268466 (-)
WSB/EiJ	ENSIUOG00005026257	lncRNA gene	Chr6:70926801-70949394 (-)

Homology

• Gene Tree
  Gm31747
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  7 phenotype references
  

• All Mutations and Alleles
  2
• Gene trapped
  1
• Spontaneous
  1
• Genomic Mutations
  1 involving Gm31747
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  26
• RefSeq
  1

• Ensembl
  ENSMUSG00000107441 (Evidence)
• NCBI Gene
  102634075

Representative Sequences			Length	Strain/Species
genomic	102634075	NCBI Gene Model | MGI Sequence Detail	22565	C57BL/6J
transcript	NR_157242	RefSeq | MGI Sequence Detail	3086	ZRU/MplStud

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 12

  Phenotypes 7
• Earliest
  J:87486 Akeson EC, Chromosomal inversion discovered in C3H/HeJ mice. JAX Notes. 2003;491:15
• Latest
  J:386463 Rias E, et al., Protocol for isolation of total RNA from mouse whole cochlea using organic solvents. STAR Protoc. 2026 Mar 20;7(1):104376

TSS for Gm31747:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr61518	Chr6:73585650-73585658 (-)	2 bp