Gm31717 Gene Detail

Summary

• Symbol
  Gm31717
• Name
  predicted gene, 31717
• Synonyms
  Gm45882

• Feature Type
  lncRNA gene
  BioType Conflict
  
• IDs
  MGI:5590876
  NCBI Gene: 105243300
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr8:118402561-118407309 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  220 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5590876	lncRNA gene	Chr8:118402440-118419052 (-)
129S1/SvImJ	ENSMUSG00200043252	lncRNA gene	Chr8:112740179-112741573 (-)
A/J	ENSMUSG00195026958	lncRNA gene	Chr8:113024887-113026281 (-)
AKR/J	ENSMUSG00220044434	lncRNA gene	Chr8:113215340-113216734 (-)
BALB/cJ	ENSMUSG00180030473	lncRNA gene	Chr8:113070824-113072218 (-)
C3H/HeJ	ENSMUSG00175033183	lncRNA gene	Chr8:113127443-113128837 (-)
C57BL/6NJ	ENSMUSG00215034860	lncRNA gene	Chr8:112701151-112702545 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005034694	lncRNA gene	Chr8:112441970-112443363 (-)
CBA/J	ENSMUSG00210036765	lncRNA gene	Chr8:113054824-113056218 (-)
DBA/2J	ENSMUSG00185018895	lncRNA gene	Chr8:119153465-119154859 (-)
FVB/NJ	ENSMUSG00205025045	lncRNA gene	Chr8:112036560-112037954 (-)
JF1/MsJ	ENSUMUG00000035772	lncRNA gene	Chr8:121459882-121461276 (-)
LP/J	ENSMUSG00230031568	lncRNA gene	Chr8:122793807-122795201 (-)
NOD/ShiLtJ	ENSMUSG00190022090	lncRNA gene	Chr8:113170852-113172246 (-)
NZO/HlLtJ	ENSMUSG00225043658	lncRNA gene	Chr8:126159602-126160996 (-)
PWK/PhJ	ENSLUMG00010041007	lncRNA gene	Chr8:112879990-112881383 (-)
SPRET/EiJ	ENSMSPG00010042175	lncRNA gene	Chr8:115077254-115078648 (-)
WSB/EiJ	ENSIUOG00005032228	lncRNA gene	Chr8:113920274-113921668 (-)

Homology

• Gene Tree
  Gm31717
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  39
• RefSeq
  1

• Ensembl
  ENSMUSG00000110459 (Evidence)
• NCBI Gene
  105243300

Representative Sequences			Length	Strain/Species
genomic	105243300	NCBI Gene Model | MGI Sequence Detail	4749	C57BL/6J

Other
Accession IDs

MGI:5804997

References

• Summaries
  All 5
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;