Gm31711 Gene Detail

Summary

• Symbol
  Gm31711
• Name
  predicted gene, 31711

• Feature Type
  lncRNA gene
  BioType Conflict
  
• IDs
  MGI:5590870
  NCBI Gene: 102634027
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:16388154-16388349 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  140 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5590870	lncRNA gene	Chr13:16326146-16435934 (-)
129S1/SvImJ	ENSMUSG00200014778	pseudogene	Chr13:13591912-13592107 (-)
A/J	ENSMUSG00195039031	pseudogene	Chr13:12685545-12685740 (-)
AKR/J	ENSMUSG00220034689	pseudogene	Chr13:12711325-12711520 (-)
BALB/cJ	ENSMUSG00180038057	pseudogene	Chr13:13040236-13040431 (-)
C3H/HeJ	ENSMUSG00175038452	pseudogene	Chr13:13136565-13136760 (-)
C57BL/6NJ	ENSMUSG00215032730	pseudogene	Chr13:13143656-13143851 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005014413	pseudogene	Chr13:13265351-13265546 (-)
CBA/J	ENSMUSG00210031254	pseudogene	Chr13:13002124-13002319 (-)
DBA/2J	ENSMUSG00185014268	pseudogene	Chr13:13696952-13697147 (-)
FVB/NJ	ENSMUSG00205052241	pseudogene	Chr13:12913871-12914066 (-)
JF1/MsJ	ENSUMUG00000024357	pseudogene	Chr13:13540984-13541179 (-)
LP/J	ENSMUSG00230036694	pseudogene	Chr13:23105851-23106046 (-)
NOD/ShiLtJ	ENSMUSG00190026191	pseudogene	Chr13:13002063-13002258 (-)
NZO/HlLtJ	ENSMUSG00225032569	pseudogene	Chr13:16906736-16906931 (-)
PWK/PhJ	ENSLUMG00010031614	pseudogene	Chr13:12510543-12510738 (-)
SPRET/EiJ	ENSMSPG00010019651	pseudogene	Chr13:12133073-12133269 (-)
WSB/EiJ	ENSIUOG00005034801	pseudogene	Chr13:12344744-12344939 (-)

Homology

• Gene Tree
  Gm31711
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  26
• RefSeq
  5

• Ensembl
  ENSMUSG00000112962 (Evidence)
• NCBI Gene
  102634027

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000112962	Ensembl Gene Model | MGI Sequence Detail	196	C57BL/6J
transcript	ENSMUST00000220687	Ensembl | MGI Sequence Detail	196	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;