Gm31663 Pseudogene Detail

Summary

• Symbol
  Gm31663
• Name
  predicted gene, 31663

• Feature Type
  pseudogene
• IDs
  MGI:5590822
  NCBI Gene: 102633966
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr7:92629084-92655721 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  988 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5590822	pseudogene	Chr7:92628463-92655749 (+)
129S1/SvImJ	ENSMUSG00200028723	pseudogene	Chr7:79408385-79436108 (+)
A/J	ENSMUSG00195039367	pseudogene	Chr7:83923834-83950466 (+)
AKR/J	ENSMUSG00220043436	pseudogene	Chr7:77389851-77416494 (+)
BALB/cJ	ENSMUSG00180040845	pseudogene	Chr7:80592154-80618792 (+)
C3H/HeJ	ENSMUSG00175025270	pseudogene	Chr7:81291222-81318914 (+)
C57BL/6NJ	ENSMUSG00215028353	pseudogene	Chr7:80469292-80495933 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005032369	pseudogene	Chr7:83861296-83908145 (+)
CBA/J	ENSMUSG00210025444	pseudogene	Chr7:81133056-81160742 (+)
DBA/2J	ENSMUSG00185033286	pseudogene	Chr7:85462839-85490532 (+)
FVB/NJ	ENSMUSG00205039252	pseudogene	Chr7:81091662-81119336 (+)
JF1/MsJ	ENSUMUG00000020762	pseudogene	Chr7:90406511-90433142 (+)
LP/J	ENSMUSG00230045750	pseudogene	Chr7:91551861-91579548 (+)
NOD/ShiLtJ	ENSMUSG00190022963	pseudogene	Chr7:81343282-81369925 (+)
NZO/HlLtJ	ENSMUSG00225012060	pseudogene	Chr7:89826912-89854602 (+)
PWK/PhJ	ENSLUMG00010039894	pseudogene	Chr7:79615454-79642118 (+)
SPRET/EiJ	ENSMSPG00010013339	pseudogene	Chr7:80723194-80756903 (+)
WSB/EiJ	ENSIUOG00005010905	pseudogene	Chr7:81777032-81803966 (+)

Homology

• Gene Tree
  Gm31663
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm31663
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000108994 (Evidence)
• NCBI Gene
  102633966

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000108994	Ensembl Gene Model | MGI Sequence Detail	26638	C57BL/6J
transcript	ENSMUST00000208481	Ensembl | MGI Sequence Detail	1190	Not Applicable

References

• Summaries
  All 6

  Phenotypes 3
• Earliest
  J:88307 Giometti CS, et al., The analysis of recessive lethal mutations in mice by using two-dimensional gel electrophoresis of liver proteins. Mutat Res. 1990 Sep;242(1):47-55

TSS for Gm31663:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr67879	Chr7:92631294-92631328 (+)	2,227 bp