Gm31600 Gene Detail

Summary

• Symbol
  Gm31600
• Name
  predicted gene, 31600

• Feature Type
  lncRNA gene
• IDs
  MGI:5590759
  NCBI Gene: 102633878
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:37945510-37951911 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  258 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5590759	lncRNA gene	Chr13:37945510-37952995 (+)
129S1/SvImJ	ENSMUSG00200013654	lncRNA gene	Chr13:35171861-35178261 (+)
A/J	ENSMUSG00195033852	lncRNA gene	Chr13:34248164-34254563 (+)
AKR/J	ENSMUSG00220035830	lncRNA gene	Chr13:34017636-34024035 (+)
BALB/cJ	ENSMUSG00180008308	lncRNA gene	Chr13:34553778-34560177 (+)
C3H/HeJ	ENSMUSG00175014974	lncRNA gene	Chr13:34506447-34512846 (+)
C57BL/6NJ	ENSMUSG00215014992	lncRNA gene	Chr13:34675519-34681918 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005035277	lncRNA gene	Chr13:34607818-34614225 (+)
CBA/J	ENSMUSG00210011999	lncRNA gene	Chr13:34514149-34520548 (+)
DBA/2J	ENSMUSG00185033271	lncRNA gene	Chr13:35340716-35347115 (+)
FVB/NJ	ENSMUSG00205038397	lncRNA gene	Chr13:34210132-34216531 (+)
JF1/MsJ	ENSUMUG00000033954	lncRNA gene	Chr13:34902446-34908872 (+)
LP/J	ENSMUSG00230016428	lncRNA gene	Chr13:44657084-44663483 (+)
NOD/ShiLtJ	ENSMUSG00190013512	lncRNA gene	Chr13:34736776-34743175 (+)
NZO/HlLtJ	ENSMUSG00225034959	lncRNA gene	Chr13:38450328-38456727 (+)
PWK/PhJ	ENSLUMG00010030642	lncRNA gene	Chr13:33731189-33737612 (+)
SPRET/EiJ	ENSMSPG00010011670	lncRNA gene	Chr13:33743724-33750061 (+)
WSB/EiJ	ENSIUOG00005029392	lncRNA gene	Chr13:33876106-33882505 (+)

Homology

• Gene Tree
  Gm31600
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm31600
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  26
• RefSeq
  2

• Ensembl
  ENSMUSG00000114800 (Evidence)
• NCBI Gene
  102633878

Representative Sequences			Length	Strain/Species
genomic	102633878	NCBI Gene Model | MGI Sequence Detail	6402	C57BL/6J
transcript	XR_382211	RefSeq | MGI Sequence Detail	764	C57BL/6J

References

• Summaries
  All 6

  Phenotypes 3
• Earliest
  J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69