Gm31577 Gene Detail

Summary

• Symbol
  Gm31577
• Name
  predicted gene, 31577

• Feature Type
  lncRNA gene
• IDs
  MGI:5590736
  NCBI Gene: 102633849
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr14:7147880-7159657 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  553 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5590736	lncRNA gene	Chr14:7147880-7165440 (+)
129S1/SvImJ	ENSMUSG00200025855	lncRNA gene	Chr14:3745838-3763359 (+)
A/J	ENSMUSG00195031761	lncRNA gene	Chr14:4609448-4626905 (+)
AKR/J	ENSMUSG00220023839	lncRNA gene	Chr14:3769569-3787025 (+)
BALB/cJ	ENSMUSG00180024008	lncRNA gene	Chr14:3928476-3950601 (+)
C3H/HeJ	ENSMUSG00175009462	lncRNA gene	Chr14:3889964-3907485 (+)
C57BL/6NJ	ENSMUSG00215020522	lncRNA gene	Chr14:4187627-4205081 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005030878	lncRNA gene	Chr14:3862784-3880293 (+)
CBA/J	ENSMUSG00210036572	lncRNA gene	Chr14:4112410-4129932 (+)
DBA/2J	ENSMUSG00185037241	lncRNA gene	Chr14:4118153-4135676 (+)
FVB/NJ	ENSMUSG00205024602	lncRNA gene	Chr14:4155016-4172474 (+)
JF1/MsJ	ENSUMUG00000025251	lncRNA gene	Chr14:4120058-4137577 (+)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190033088	lncRNA gene	Chr14:4181480-4198935 (+)
NZO/HlLtJ	ENSMUSG00225037487	lncRNA gene	Chr14:4582689-4600134 (+)
PWK/PhJ	ENSLUMG00010032934	lncRNA gene	Chr14:25437822-25455343 (+)
SPRET/EiJ	ENSMSPG00010002748	lncRNA gene	Chr14:4356308-4374014 (+)
WSB/EiJ	ENSIUOG00005024909	lncRNA gene	Chr14:3999767-4017229 (+)

Homology

• Gene Tree
  Gm31577
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  30
• RefSeq
  3

• Ensembl
  ENSMUSG00000114789 (Evidence)
• NCBI Gene
  102633849

Representative Sequences			Length	Strain/Species
genomic	102633849	NCBI Gene Model | MGI Sequence Detail	11778	C57BL/6J
transcript	XR_001781175	RefSeq | MGI Sequence Detail	2573	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;