Gm31562 Gene Detail

Summary

• Symbol
  Gm31562
• Name
  predicted gene, 31562

• Feature Type
  lncRNA gene
• IDs
  MGI:5590721
  NCBI Gene: 102633831
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:39120807-39131124 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  404 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5590721	lncRNA gene	Chr10:39109471-39131124 (+)
129S1/SvImJ	ENSMUSG00200010033	lncRNA gene	Chr10:35976266-35986320 (+)
A/J	ENSMUSG00195017424	lncRNA gene	Chr10:36278864-36288918 (+)
AKR/J	ENSMUSG00220029949	lncRNA gene	Chr10:35955532-35965586 (+)
BALB/cJ	ENSMUSG00180017326	lncRNA gene	Chr10:36364135-36374189 (+)
C3H/HeJ	ENSMUSG00175012744	lncRNA gene	Chr10:36158516-36168570 (+)
C57BL/6NJ	ENSMUSG00215009978	lncRNA gene	Chr10:35909023-35919077 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005029312	lncRNA gene	Chr10:36345068-36355133 (+)
CBA/J	ENSMUSG00210026167	lncRNA gene	Chr10:36052017-36062071 (+)
DBA/2J	ENSMUSG00185008707	lncRNA gene	Chr10:36204563-36214617 (+)
FVB/NJ	ENSMUSG00205014008	lncRNA gene	Chr10:36119146-36129200 (+)
JF1/MsJ	ENSUMUG00000035989	lncRNA gene	Chr10:35951656-35961683 (+)
LP/J	ENSMUSG00230016492	lncRNA gene	Chr10:37965326-37975380 (+)
NOD/ShiLtJ	ENSMUSG00190035493	lncRNA gene	Chr10:36332915-36342969 (+)
NZO/HlLtJ	ENSMUSG00225018101	lncRNA gene	Chr10:42292305-42302218 (+)
PWK/PhJ	ENSLUMG00010007946	lncRNA gene	Chr10:36075670-36085692 (+)
SPRET/EiJ	ENSMSPG00010020583	lncRNA gene	Chr10:37122411-37132559 (+)
WSB/EiJ	ENSIUOG00005015414	lncRNA gene	Chr10:35865406-35875460 (+)

Homology

• Gene Tree
  Gm31562
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  6 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm31562
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  2

• Ensembl
  ENSMUSG00000111008 (Evidence)
• NCBI Gene
  102633831

Representative Sequences			Length	Strain/Species
genomic	102633831	NCBI Gene Model | MGI Sequence Detail	10318	C57BL/6J
transcript	XR_380248	RefSeq | MGI Sequence Detail	3443	C57BL/6J

References

• Summaries
  All 9

  Phenotypes 6
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
• Latest
  J:74548 Benson KF, et al., Molecular Characterization of the Mouse In(10)17Rk Inversion and Identification of a Novel Muscle-Specific Gene at the Proximal Breakpoint. Genetics. 2002 Jan;160(1):279-87