Gm31502 Gene Detail

Summary

• Symbol
  Gm31502
• Name
  predicted gene, 31502

• Feature Type
  lncRNA gene
• IDs
  MGI:5590661
  NCBI Gene: 102633751
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr18:69891973-69912853 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  604 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5590661	lncRNA gene	Chr18:69866739-69930725 (-)
129S1/SvImJ	ENSMUSG00200026016	lncRNA gene	Chr18:67117756-67139199 (-)
A/J	ENSMUSG00195034270	lncRNA gene	Chr18:67153828-67175286 (-)
AKR/J	ENSMUSG00220023566	lncRNA gene	Chr18:67092764-67114196 (-)
BALB/cJ	ENSMUSG00180012463	lncRNA gene	Chr18:67720851-67742312 (-)
C3H/HeJ	ENSMUSG00175010509	lncRNA gene	Chr18:67300887-67322313 (-)
C57BL/6NJ	ENSMUSG00215021527	lncRNA gene	Chr18:66652452-66673898 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005015847	lncRNA gene	Chr18:66311392-66332934 (-)
CBA/J	ENSMUSG00210031718	lncRNA gene	Chr18:67259021-67280490 (-)
DBA/2J	ENSMUSG00185031218	lncRNA gene	Chr18:67165025-67186451 (-)
FVB/NJ	ENSMUSG00205013864	lncRNA gene	Chr18:66630040-66651487 (-)
JF1/MsJ	ENSUMUG00000044670	lncRNA gene	Chr18:67096859-67116640 (-)
LP/J	ENSMUSG00230040725	lncRNA gene	Chr18:69246397-69267840 (-)
NOD/ShiLtJ	ENSMUSG00190008235	lncRNA gene	Chr18:66899005-66920466 (-)
NZO/HlLtJ	ENSMUSG00225031126	lncRNA gene	Chr18:69106078-69127526 (-)
PWK/PhJ	ENSLUMG00010027645	lncRNA gene	Chr18:67506157-67525907 (-)
SPRET/EiJ	ENSMSPG00010039990	lncRNA gene	Chr18:67681903-67701750 (-)
WSB/EiJ	ENSIUOG00005006562	lncRNA gene	Chr18:66712940-66759482 (-)

Homology

• Gene Tree
  Gm31502
  

Sequences &
Gene Models

• All Sequences
  30
• RefSeq
  1

• Ensembl
  ENSMUSG00000120532 (Evidence)
• NCBI Gene
  102633751

Representative Sequences			Length	Strain/Species
genomic	102633751	NCBI Gene Model | MGI Sequence Detail	20881	C57BL/6J
transcript	XR_877536	RefSeq | MGI Sequence Detail	420	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm31502:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr153822	Chr18:69912793-69912842 (-)	35 bp