Gm31499 Gene Detail

Summary

• Symbol
  Gm31499
• Name
  predicted gene, 31499

• Feature Type
  lncRNA gene
• IDs
  MGI:5590658
  NCBI Gene: 102633747
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr17:88473503-88479436 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  292 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5590658	lncRNA gene	Chr17:88467343-88479436 (+)
129S1/SvImJ	ENSMUSG00200023179	lncRNA gene	Chr17:83888797-83890918 (+)
A/J	ENSMUSG00195030073	lncRNA gene	Chr17:85287594-85289712 (+)
AKR/J	ENSMUSG00220016576	lncRNA gene	Chr17:84219547-84221666 (+)
BALB/cJ	ENSMUSG00180026923	lncRNA gene	Chr17:84959677-84961794 (+)
C3H/HeJ	ENSMUSG00175007082	lncRNA gene	Chr17:84225524-84227641 (+)
C57BL/6NJ	ENSMUSG00215020712	lncRNA gene	Chr17:83923601-83925718 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005011822	lncRNA gene	Chr17:84770539-84772659 (+)
CBA/J	ENSMUSG00210022397	lncRNA gene	Chr17:84084134-84086251 (+)
DBA/2J	ENSMUSG00185020401	lncRNA gene	Chr17:86883201-86885318 (+)
FVB/NJ	ENSMUSG00205006249	lncRNA gene	Chr17:84701403-84703520 (+)
JF1/MsJ	ENSUMUG00000018532	lncRNA gene	Chr17:86637387-86639494 (+)
LP/J	ENSMUSG00230010730	lncRNA gene	Chr17:87925626-87927743 (+)
NOD/ShiLtJ	ENSMUSG00190009774	lncRNA gene	Chr17:83964418-83966535 (+)
NZO/HlLtJ	ENSMUSG00225031380	lncRNA gene	Chr17:90167510-90169632 (+)
PWK/PhJ	ENSLUMG00010032063	lncRNA gene	Chr17:83850666-83852774 (+)
SPRET/EiJ	ENSMSPG00010020880	lncRNA gene	Chr17:84432202-84434331 (+)
WSB/EiJ	ENSIUOG00005022058	lncRNA gene	Chr17:84887757-84889875 (+)

Homology

• Gene Tree
  Gm31499
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Gene trapped
  1
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  25
• RefSeq
  1

• Ensembl
  ENSMUSG00000117369 (Evidence)
• NCBI Gene
  102633747

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000117369	Ensembl Gene Model | MGI Sequence Detail	5934	C57BL/6J
transcript	ENSMUST00000233989	Ensembl | MGI Sequence Detail	725	Not Applicable

References

• Summaries
  All 5

  Phenotypes 2
• Earliest
  J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14