Gm31462 Gene Detail

Summary

• Symbol
  Gm31462
• Name
  predicted gene, 31462

• Feature Type
  lncRNA gene
• IDs
  MGI:5590621
  NCBI Gene: 102633701
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr15:80889608-80891033 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  98 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5590621	lncRNA gene	Chr15:80889608-80891033 (-)
129S1/SvImJ	ENSMUSG00200054180	lncRNA gene	Chr15:77991987-77992990 (-)
A/J	ENSMUSG00195052378	lncRNA gene	Chr15:77938834-77939837 (-)
AKR/J	ENSMUSG00220053148	lncRNA gene	Chr15:77981928-77982931 (-)
BALB/cJ	ENSMUSG00180053952	lncRNA gene	Chr15:77815854-77816857 (-)
C3H/HeJ	ENSMUSG00175053239	lncRNA gene	Chr15:78126892-78127895 (-)
C57BL/6NJ	ENSMUSG00215052940	lncRNA gene	Chr15:77900535-77901538 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005048185	lncRNA gene	Chr15:77431737-77432740 (-)
CBA/J	ENSMUSG00210049532	lncRNA gene	Chr15:77901987-77902990 (-)
DBA/2J	ENSMUSG00185051737	lncRNA gene	Chr15:77924379-77925382 (-)
FVB/NJ	ENSMUSG00205051967	lncRNA gene	Chr15:77639333-77640336 (-)
JF1/MsJ	ENSUMUG00000056721	lncRNA gene	Chr15:77491522-77492737 (-)
LP/J	ENSMUSG00230052678	lncRNA gene	Chr15:81241190-81242193 (-)
NOD/ShiLtJ	ENSMUSG00190053759	lncRNA gene	Chr15:77919130-77920133 (-)
NZO/HlLtJ	ENSMUSG00225050653	lncRNA gene	Chr15:81582843-81583846 (-)
PWK/PhJ	ENSLUMG00010053172	lncRNA gene	Chr15:77712741-77713954 (-)
SPRET/EiJ	ENSMSPG00010051020	lncRNA gene	Chr15:79368159-79369154 (-)
WSB/EiJ	ENSIUOG00005050600	lncRNA gene	Chr15:77985131-77986134 (-)

Homology

• Gene Tree
  Gm31462
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm31462
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000115976 (Evidence)
• NCBI Gene
  102633701

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000115976	Ensembl Gene Model | MGI Sequence Detail	1426	C57BL/6J
transcript	ENSMUST00000230118	Ensembl | MGI Sequence Detail	544	Not Applicable

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 6

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;