Gm31314 Gene Detail

Summary

• Symbol
  Gm31314
• Name
  predicted gene, 31314

• Feature Type
  lncRNA gene
• IDs
  MGI:5590473
  NCBI Gene: 102633504
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr5:119656860-119666022 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  338 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5590473	lncRNA gene	Chr5:119610038-119666092 (-)
129S1/SvImJ	ENSMUSG00200029212	lncRNA gene	Chr5:113404869-113414084 (-)
A/J	ENSMUSG00195012445	lncRNA gene	Chr5:112925814-112935030 (-)
AKR/J	ENSMUSG00220046089	lncRNA gene	Chr5:112417144-112426357 (-)
BALB/cJ	ENSMUSG00180041846	lncRNA gene	Chr5:113040360-113049575 (-)
C3H/HeJ	ENSMUSG00175031963	lncRNA gene	Chr5:115035182-115044400 (-)
C57BL/6NJ	ENSMUSG00215043420	lncRNA gene	Chr5:113062482-113071642 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0006178	lincRNA gene	Chr5:112477895-112486598 (-)
CAST/EiJ	ENSTCUG00005041963	lncRNA gene	Chr5:112245881-112255432 (-)
CBA/J	ENSMUSG00210010261	lncRNA gene	Chr5:113786195-113795406 (-)
DBA/2J	ENSMUSG00185054263	lncRNA gene	Chr5:116850737-116859950 (-)
FVB/NJ	ENSMUSG00205047203	lncRNA gene	Chr5:112702537-112711699 (-)
JF1/MsJ	ENSUMUG00000054075	lncRNA gene	Chr5:119688319-119697520 (-)
LP/J	ENSMUSG00230049404	lncRNA gene	Chr5:120927148-120936360 (-)
NOD/ShiLtJ	ENSMUSG00190044189	lncRNA gene	Chr5:112735261-112744421 (-)
NZO/HlLtJ	ENSMUSG00225016490	lncRNA gene	Chr5:128603160-128612317 (-)
PWK/PhJ	ENSLUMG00010045031	lncRNA gene	Chr5:111588745-111597951 (-)
SPRET/EiJ	ENSMSPG00010046684	lncRNA gene	Chr5:114896427-114905061 (-)
WSB/EiJ	ENSIUOG00005019922	lncRNA gene	Chr5:115424690-115433879 (-)

Homology

• Gene Tree
  Gm31314
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm31314
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  4

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  44
• RefSeq
  1

• Ensembl
  ENSMUSG00000106938 (Evidence)
• NCBI Gene
  102633504

Representative Sequences			Length	Strain/Species
genomic	102633504	NCBI Gene Model | MGI Sequence Detail	9163	C57BL/6J
transcript	NR_166577	RefSeq | MGI Sequence Detail	612	ZRU/MplStud

Molecular
Reagents

• All nucleic 4

  cDNA 4

References

• Summaries
  All 11

  Phenotypes 5
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17

TSS for Gm31314:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr52905	Chr5:119666010-119666027 (-)	3 bp