Gm31294 Gene Detail

Summary

• Symbol
  Gm31294
• Name
  predicted gene, 31294
• Synonyms
  Gm45482

• Feature Type
  lncRNA gene
• IDs
  MGI:5590453
  NCBI Gene: 102633480
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr18:69321770-69329429 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  339 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5590453	lncRNA gene	Chr18:69293119-69331957 (-)
129S1/SvImJ	ENSMUSG00200026010	lncRNA gene	Chr18:66553347-66555790 (-)
A/J	ENSMUSG00195034255	lncRNA gene	Chr18:66581749-66584171 (-)
AKR/J	ENSMUSG00220023557	lncRNA gene	Chr18:66526796-66529230 (-)
BALB/cJ	ENSMUSG00180012457	lncRNA gene	Chr18:67148766-67151188 (-)
C3H/HeJ	ENSMUSG00175010494	lncRNA gene	Chr18:66734929-66737363 (-)
C57BL/6NJ	ENSMUSG00215021488	lncRNA gene	Chr18:66086976-66089384 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005015841	lncRNA gene	Chr18:65736231-65738635 (-)
CBA/J	ENSMUSG00210031705	lncRNA gene	Chr18:66693089-66695523 (-)
DBA/2J	ENSMUSG00185031198	lncRNA gene	Chr18:66599050-66601481 (-)
FVB/NJ	ENSMUSG00205013854	lncRNA gene	Chr18:66064169-66066597 (-)
JF1/MsJ	ENSUMUG00000044762	lncRNA gene	Chr18:66523939-66526339 (-)
LP/J	ENSMUSG00230040770	lncRNA gene	Chr18:68682030-68684471 (-)
NOD/ShiLtJ	ENSMUSG00190008230	lncRNA gene	Chr18:66327014-66329436 (-)
NZO/HlLtJ	ENSMUSG00225031146	lncRNA gene	Chr18:68533922-68536347 (-)
PWK/PhJ	ENSLUMG00010027750	lncRNA gene	Chr18:66935523-66937924 (-)
SPRET/EiJ	ENSMSPG00010039975	lncRNA gene	Chr18:67104998-67107446 (-)
WSB/EiJ	ENSIUOG00005006582	lncRNA gene	Chr18:66149284-66151721 (-)

Homology

• Gene Tree
  Gm31294
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  33
• RefSeq
  3

• Ensembl
  ENSMUSG00000110211 (Evidence)
• NCBI Gene
  102633480

Representative Sequences			Length	Strain/Species
genomic	102633480	NCBI Gene Model | MGI Sequence Detail	7660	C57BL/6J
transcript	XR_386318	RefSeq | MGI Sequence Detail	2129	C57BL/6J

Other
Accession IDs

MGI:5791318

References

• Summaries
  All 5
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;