Gm31219 Gene Detail

Summary

• Symbol
  Gm31219
• Name
  predicted gene, 31219

• Feature Type
  lncRNA gene
• IDs
  MGI:5590378
  NCBI Gene: 102633384
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:76394375-76427094 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  1037 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5590378	lncRNA gene	Chr13:76394345-76427094 (+)
129S1/SvImJ	ENSMUSG00200006100	lncRNA gene	Chr13:70823938-70846751 (+)
A/J	ENSMUSG00195026274	lncRNA gene	Chr13:71383600-71406414 (+)
AKR/J	ENSMUSG00220040848	lncRNA gene	Chr13:69964538-69987299 (+)
BALB/cJ	ENSMUSG00180001518	lncRNA gene	Chr13:71881838-71904650 (+)
C3H/HeJ	ENSMUSG00175019983	lncRNA gene	Chr13:72160137-72182950 (+)
C57BL/6NJ	ENSMUSG00215002560	lncRNA gene	Chr13:71976988-72000013 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005004174	lncRNA gene	Chr13:71448874-71472000 (+)
CBA/J	ENSMUSG00210005908	lncRNA gene	Chr13:71468889-71491649 (+)
DBA/2J	ENSMUSG00185018845	lncRNA gene	Chr13:75156994-75179756 (+)
FVB/NJ	ENSMUSG00205013921	lncRNA gene	Chr13:70857626-70880433 (+)
JF1/MsJ	ENSUMUG00000035455	lncRNA gene	Chr13:74922087-74945119 (+)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190008858	lncRNA gene	Chr13:71499184-71521979 (+)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010014798	lncRNA gene	Chr13:71030157-71053959 (+)
SPRET/EiJ	ENSMSPG00010001414	lncRNA gene	Chr13:71912129-71935229 (+)
WSB/EiJ	ENSIUOG00005017941	lncRNA gene	Chr13:70706961-70732725 (+)

Homology

• Gene Tree
  Gm31219
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm31219
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  2

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  25
• RefSeq
  2
• UniProt
  1

• Ensembl
  ENSMUSG00000114242 (Evidence)
• NCBI Gene
  102633384

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000114242	Ensembl Gene Model | MGI Sequence Detail	32720	C57BL/6J
transcript	ENSMUST00000224604	Ensembl | MGI Sequence Detail	2162	Not Applicable
polypeptide	Q3UWX4	UniProt | EBI | MGI Sequence Detail	61	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 2

  cDNA 2

References

• Summaries
  All 9

  Phenotypes 3
• Earliest
  J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69