Gm31126 Gene Detail

Summary

• Symbol
  Gm31126
• Name
  predicted gene, 31126

• Feature Type
  lncRNA gene
• IDs
  MGI:5590285
  NCBI Gene: 102633258
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:50421878-50443868 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  353 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5590285	lncRNA gene	Chr13:50399939-50510331 (+)
129S1/SvImJ	ENSMUSG00200036285	lncRNA gene	Chr13:47550970-47559664 (+)
A/J	ENSMUSG00195030887	lncRNA gene	Chr13:47018023-47026717 (-)
AKR/J	ENSMUSG00220009906	lncRNA gene	Chr13:46816975-46825670 (-)
BALB/cJ	ENSMUSG00180009166	lncRNA gene	Chr13:47037122-47045816 (+)
C3H/HeJ	ENSMUSG00175029730	lncRNA gene	Chr13:47072653-47081345 (-)
C57BL/6NJ	ENSMUSG00215008302	lncRNA gene	Chr13:47218022-47226685 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005032867	lncRNA gene	Chr13:47444070-47452865 (-)
CBA/J	ENSMUSG00210028584	lncRNA gene	Chr13:47029407-47038101 (+)
DBA/2J	ENSMUSG00185032640	lncRNA gene	Chr13:47843517-47852210 (+)
FVB/NJ	ENSMUSG00205013252	lncRNA gene	Chr13:47076165-47085783 (-)
JF1/MsJ	ENSUMUG00000020014	lncRNA gene	Chr13:47508904-47517590 (-)
LP/J	ENSMUSG00230029243	lncRNA gene	Chr13:57164289-57172983 (+)
NOD/ShiLtJ	ENSMUSG00190012899	lncRNA gene	Chr13:46955467-46964161 (+)
NZO/HlLtJ	ENSMUSG00225036539	lncRNA gene	Chr13:50914712-50923406 (+)
PWK/PhJ	ENSLUMG00010022331	lncRNA gene	Chr13:46161106-46169760 (+)
PWK/PhJ	ENSLUMG00010022841	lncRNA gene	Chr13:46034255-46042905 (+)
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm31126
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm31126
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  75
• RefSeq
  8

• Ensembl
  ENSMUSG00000114035 (Evidence)
• NCBI Gene
  102633258

Representative Sequences			Length	Strain/Species
genomic	102633258	NCBI Gene Model | MGI Sequence Detail	21991	C57BL/6J
transcript	AK030049	GenBank | ENA | DDBJ | MGI Sequence Detail	2622	C57BL/6J

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 7

  Phenotypes 3
• Earliest
  J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69