Gm31049 Pseudogene Detail

Summary

• Symbol
  Gm31049
• Name
  predicted gene, 31049

• Feature Type
  pseudogene
• IDs
  MGI:5590208
  NCBI Gene: 102633147
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr5:77835223-77837059 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  192 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5590208	pseudogene	Chr5:77828947-77837062 (+)
129S1/SvImJ	ENSMUSG00200001463	pseudogene	Chr5:73533845-73535681 (+)
A/J	ENSMUSG00195010779	pseudogene	Chr5:72841899-72843735 (+)
AKR/J	no annotation
BALB/cJ	ENSMUSG00180000089	pseudogene	Chr5:72601792-72603628 (+)
C3H/HeJ	ENSMUSG00175004255	pseudogene	Chr5:74629946-74631782 (+)
C57BL/6NJ	ENSMUSG00215000479	pseudogene	Chr5:73413922-73415758 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0037359	pseudogene	Chr5:70685905-70687640 (+)
CAST/EiJ	ENSTCUG00005013874	pseudogene	Chr5:72359978-72361835 (+)
CBA/J	ENSMUSG00210000704	pseudogene	Chr5:73567813-73569649 (+)
DBA/2J	ENSMUSG00185016582	pseudogene	Chr5:75397786-75399622 (+)
FVB/NJ	ENSMUSG00205001146	pseudogene	Chr5:72356434-72358270 (+)
JF1/MsJ	ENSUMUG00000006847	pseudogene	Chr5:79885756-79887584 (+)
LP/J	ENSMUSG00230022607	pseudogene	Chr5:80107726-80109562 (+)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	ENSMUSG00225034442	pseudogene	Chr5:85154808-85156644 (+)
PWK/PhJ	no annotation
SPRET/EiJ	ENSMSPG00010010224	pseudogene	Chr5:74478689-74480513 (+)
WSB/EiJ	ENSIUOG00005018362	pseudogene	Chr5:75354229-75356067 (+)

Homology

• Gene Tree
  Gm31049
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  2
• Spontaneous
  1
• Genomic Mutations
  3 involving Gm31049
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000106996 (Evidence)
• NCBI Gene
  102633147

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000106996	Ensembl Gene Model | MGI Sequence Detail	1837	C57BL/6J
transcript	ENSMUST00000201516	Ensembl | MGI Sequence Detail	1302	Not Applicable

References

• Summaries
  All 8

  Phenotypes 4
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17