Gm30978 Gene Detail

Summary

• Symbol
  Gm30978
• Name
  predicted gene, 30978

• Feature Type
  lncRNA gene
• IDs
  MGI:5590137
  NCBI Gene: 102633061
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr8:25905968-25944233 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  1271 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5590137	lncRNA gene	Chr8:25843192-25987044 (-)
129S1/SvImJ	ENSMUSG00200022134	lncRNA gene	Chr8:20946155-20960245 (-)
A/J	ENSMUSG00195005997	lncRNA gene	Chr8:21488012-21502106 (-)
AKR/J	ENSMUSG00220026725	lncRNA gene	Chr8:21111587-21125685 (-)
BALB/cJ	ENSMUSG00180005486	lncRNA gene	Chr8:21012594-21026690 (-)
C3H/HeJ	ENSMUSG00175006803	lncRNA gene	Chr8:21075369-21089467 (-)
C57BL/6NJ	ENSMUSG00215013193	lncRNA gene	Chr8:20990184-21004288 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005024187	lncRNA gene	Chr8:21289806-21304860 (-)
CBA/J	ENSMUSG00210014574	lncRNA gene	Chr8:21011901-21026001 (-)
DBA/2J	ENSMUSG00185040315	lncRNA gene	Chr8:26812594-26826692 (-)
FVB/NJ	ENSMUSG00205004120	lncRNA gene	Chr8:20510720-20524818 (-)
JF1/MsJ	ENSUMUG00000027434	lncRNA gene	Chr8:28684688-28699507 (-)
LP/J	ENSMUSG00230016051	lncRNA gene	Chr8:30572118-30586219 (-)
NOD/ShiLtJ	ENSMUSG00190004481	lncRNA gene	Chr8:21045367-21059467 (-)
NZO/HlLtJ	ENSMUSG00225022221	lncRNA gene	Chr8:34193476-34207569 (-)
PWK/PhJ	ENSLUMG00010026294	lncRNA gene	Chr8:21059929-21074786 (-)
SPRET/EiJ	ENSMSPG00010016747	lncRNA gene	Chr8:21340132-21354854 (-)
WSB/EiJ	ENSIUOG00005011046	lncRNA gene	Chr8:21757997-21772092 (-)

Homology

• Gene Tree
  Gm30978
  

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  57
• RefSeq
  1

• Ensembl
  ENSMUSG00000110110 (Evidence)
• NCBI Gene
  102633061

Representative Sequences			Length	Strain/Species
genomic	102633061	NCBI Gene Model | MGI Sequence Detail	38266	C57BL/6J
transcript	AK145143	GenBank | ENA | DDBJ | MGI Sequence Detail	1074	Not Specified

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 4
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;