Gm30873 Gene Detail

Summary

• Symbol
  Gm30873
• Name
  predicted gene, 30873
• Synonyms
  Gm44556

• Feature Type
  lncRNA gene
• IDs
  MGI:5590032
  NCBI Gene: 102632922
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr7:83987250-83997079 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  360 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5590032	lncRNA gene	Chr7:83986043-83998206 (+)
129S1/SvImJ	ENSMUSG00200035035	lncRNA gene	Chr7:70793555-70803322 (+)
A/J	ENSMUSG00195042104	lncRNA gene	Chr7:75258252-75268033 (+)
AKR/J	ENSMUSG00220039926	lncRNA gene	Chr7:68776429-68786207 (+)
BALB/cJ	ENSMUSG00180039445	lncRNA gene	Chr7:71963836-71973614 (+)
C3H/HeJ	ENSMUSG00175037978	lncRNA gene	Chr7:72705607-72715374 (+)
C57BL/6NJ	ENSMUSG00215035400	lncRNA gene	Chr7:71816921-71826695 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005046152	lncRNA gene	Chr7:75276546-75286467 (+)
CBA/J	ENSMUSG00210041223	lncRNA gene	Chr7:72567876-72577643 (+)
DBA/2J	ENSMUSG00185047815	lncRNA gene	Chr7:76879235-76889002 (+)
FVB/NJ	ENSMUSG00205032713	lncRNA gene	Chr7:72514617-72524391 (+)
JF1/MsJ	ENSUMUG00000020018	lncRNA gene	Chr7:81593071-81602854 (+)
LP/J	ENSMUSG00230017490	lncRNA gene	Chr7:82968618-82978385 (+)
NOD/ShiLtJ	ENSMUSG00190032534	lncRNA gene	Chr7:72720864-72730638 (+)
NZO/HlLtJ	ENSMUSG00225011509	lncRNA gene	Chr7:81243461-81253228 (+)
PWK/PhJ	ENSLUMG00010038934	lncRNA gene	Chr7:71174078-71183865 (+)
SPRET/EiJ	ENSMSPG00010012780	lncRNA gene	Chr7:71607518-71617720 (+)
WSB/EiJ	ENSIUOG00005034927	lncRNA gene	Chr7:73052408-73062182 (+)

Homology

• Gene Tree
  Gm30873
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm30873
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  30
• RefSeq
  7

• Ensembl
  ENSMUSG00000109341 (Evidence)
• NCBI Gene
  102632922

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000109341	Ensembl Gene Model | MGI Sequence Detail	9830	C57BL/6J
transcript	ENSMUST00000359822	Ensembl | MGI Sequence Detail	1323	Not Applicable

Molecular
Reagents

• All nucleic 1

  cDNA 1

Other
Accession IDs

MGI:5753132

References

• Summaries
  All 11

  Phenotypes 5
• Earliest
  J:88307 Giometti CS, et al., The analysis of recessive lethal mutations in mice by using two-dimensional gel electrophoresis of liver proteins. Mutat Res. 1990 Sep;242(1):47-55
• Latest
  J:29904 Johnson DK, et al., Molecular analysis of 36 mutations at the mouse pink-eyed dilution (p) locus. Genetics. 1995 Dec;141(4):1563-71