Gm30849 Gene Detail

Summary

• Symbol
  Gm30849
• Name
  predicted gene, 30849

• Feature Type
  lncRNA gene
• IDs
  MGI:5590008
  NCBI Gene: 102632892
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr9:90197501-90199692 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  193 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5590008	lncRNA gene	Chr9:90152280-90332172 (+)
129S1/SvImJ	ENSMUSG00200005882	lncRNA gene	Chr9:87308521-87323171 (+)
A/J	ENSMUSG00195007674	lncRNA gene	Chr9:86575926-86590576 (+)
AKR/J	ENSMUSG00220020118	lncRNA gene	Chr9:86992939-87007592 (+)
BALB/cJ	ENSMUSG00180007601	lncRNA gene	Chr9:86902515-86917166 (+)
C3H/HeJ	ENSMUSG00175004862	lncRNA gene	Chr9:87213993-87228643 (+)
C57BL/6NJ	ENSMUSG00215010334	lncRNA gene	Chr9:87193539-87208188 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005004646	lncRNA gene	Chr9:87153260-87167517 (+)
CBA/J	ENSMUSG00210006224	lncRNA gene	Chr9:87064559-87079207 (+)
DBA/2J	ENSMUSG00185002009	lncRNA gene	Chr9:87212223-87226873 (+)
FVB/NJ	ENSMUSG00205005300	lncRNA gene	Chr9:87381378-87396032 (+)
JF1/MsJ	ENSUMUG00000032066	lncRNA gene	Chr9:87013657-87027897 (+)
LP/J	ENSMUSG00230010305	lncRNA gene	Chr9:87414974-87429624 (+)
NOD/ShiLtJ	ENSMUSG00190011753	lncRNA gene	Chr9:86859728-86874376 (+)
NZO/HlLtJ	ENSMUSG00225016174	lncRNA gene	Chr9:87513077-87527727 (+)
PWK/PhJ	ENSLUMG00010003132	lncRNA gene	Chr9:86934513-86955461 (+)
SPRET/EiJ	ENSMSPG00010002914	lncRNA gene	Chr9:88554807-88554854 (+)
WSB/EiJ	ENSIUOG00005003785	lncRNA gene	Chr9:86244774-86259425 (+)

Homology

• Gene Tree
  Gm30849
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm30849
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  30
• RefSeq
  1

• Ensembl
  ENSMUSG00000111666 (Evidence)
• NCBI Gene
  102632892

Representative Sequences			Length	Strain/Species
genomic	102632892	NCBI Gene Model | MGI Sequence Detail	2192	C57BL/6J
transcript	XR_379695	RefSeq | MGI Sequence Detail	599	C57BL/6J

References

• Summaries
  All 5

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;