Gm30839 Pseudogene Detail

Summary

• Symbol
  Gm30839
• Name
  predicted gene, 30839

• Feature Type
  pseudogene
• IDs
  MGI:5589998
  NCBI Gene: 102632877
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:110996947-110997205 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  154 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5589998	pseudogene	Chr13:110996875-110997205 (-)
129S1/SvImJ	ENSMUSG00200033252	pseudogene	Chr13:105457648-105457906 (-)
A/J	ENSMUSG00195013887	pseudogene	Chr13:105981804-105982062 (-)
AKR/J	ENSMUSG00220030565	pseudogene	Chr13:104414733-104414991 (-)
BALB/cJ	ENSMUSG00180031277	pseudogene	Chr13:106563496-106563754 (-)
C3H/HeJ	ENSMUSG00175026935	pseudogene	Chr13:106641334-106641592 (-)
C57BL/6NJ	ENSMUSG00215028574	pseudogene	Chr13:106655167-106655425 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005026132	pseudogene	Chr13:105704849-105705107 (-)
CBA/J	ENSMUSG00210011109	pseudogene	Chr13:105968529-105968787 (-)
DBA/2J	ENSMUSG00185027375	pseudogene	Chr13:109732957-109733215 (-)
FVB/NJ	ENSMUSG00205007038	pseudogene	Chr13:105413795-105414053 (-)
JF1/MsJ	ENSUMUG00000013281	pseudogene	Chr13:109221735-109221993 (-)
LP/J	ENSMUSG00230007607	pseudogene	Chr13:119925307-119925565 (-)
NOD/ShiLtJ	ENSMUSG00190020312	pseudogene	Chr13:106279121-106279379 (-)
NZO/HlLtJ	ENSMUSG00225031503	pseudogene	Chr13:112142205-112142463 (-)
PWK/PhJ	ENSLUMG00010010616	pseudogene	Chr13:105244007-105244265 (-)
SPRET/EiJ	ENSMSPG00010017366	pseudogene	Chr13:106924126-106924384 (-)
WSB/EiJ	ENSIUOG00005009799	pseudogene	Chr13:105440636-105440894 (-)

Homology

• Gene Tree
  Gm30839
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000114320 (Evidence)
• NCBI Gene
  102632877

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000114320	Ensembl Gene Model | MGI Sequence Detail	259	C57BL/6J
transcript	ENSMUST00000224712	Ensembl | MGI Sequence Detail	259	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;