Gm30808 Gene Detail

Summary

• Symbol
  Gm30808
• Name
  predicted gene, 30808

• Feature Type
  lncRNA gene
• IDs
  MGI:5589967
  NCBI Gene: 102632840
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr7:138302704-138304982 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  181 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5589967	lncRNA gene	Chr7:138302566-138321271 (+)
129S1/SvImJ	ENSMUSG00200047274	lncRNA gene	Chr7:124858734-124861128 (+)
A/J	ENSMUSG00195041561	lncRNA gene	Chr7:129329449-129331843 (+)
AKR/J	ENSMUSG00220038166	lncRNA gene	Chr7:122818195-122820588 (+)
BALB/cJ	ENSMUSG00180040725	lncRNA gene	Chr7:126033235-126035630 (+)
C3H/HeJ	ENSMUSG00175041743	lncRNA gene	Chr7:126761514-126763908 (+)
C57BL/6NJ	ENSMUSG00215048756	lncRNA gene	Chr7:126034991-126037385 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005051088	lncRNA gene	Chr7:129322550-129324982 (+)
CBA/J	ENSMUSG00210030951	lncRNA gene	Chr7:126509842-126512235 (+)
DBA/2J	ENSMUSG00185024377	lncRNA gene	Chr7:130798227-130800646 (+)
FVB/NJ	ENSMUSG00205044959	lncRNA gene	Chr7:126484623-126487017 (+)
JF1/MsJ	ENSUMUG00000048409	lncRNA gene	Chr7:135887142-135889552 (+)
LP/J	ENSMUSG00230043635	lncRNA gene	Chr7:136961776-136964170 (+)
NOD/ShiLtJ	ENSMUSG00190033378	lncRNA gene	Chr7:126633719-126636135 (+)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010049429	lncRNA gene	Chr7:125041219-125043610 (+)
SPRET/EiJ	ENSMSPG00010045321	lncRNA gene	Chr7:126377458-126379857 (+)
WSB/EiJ	ENSIUOG00005035693	lncRNA gene	Chr7:127327383-127329777 (+)

Homology

• Gene Tree
  Gm30808
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  25
• RefSeq
  1

• Ensembl
  ENSMUSG00000109802 (Evidence)
• NCBI Gene
  102632840

Representative Sequences			Length	Strain/Species
genomic	102632840	NCBI Gene Model | MGI Sequence Detail	2279	C57BL/6J
transcript	XR_378600	RefSeq | MGI Sequence Detail	729	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;