Gm30786 Gene Detail

Summary

• Symbol
  Gm30786
• Name
  predicted gene, 30786

• Feature Type
  lncRNA gene
• IDs
  MGI:5589945
  NCBI Gene: 102632808
• Alliance
  genome feature page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr11:65533238-65551187 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  572 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5589945	lncRNA gene	Chr11:65396197-65551187 (-)
129S1/SvImJ	ENSMUSG00200050460	lncRNA gene	Chr11:62465921-62473550 (-)
A/J	ENSMUSG00195052799	lncRNA gene	Chr11:62498867-62506483 (-)
AKR/J	ENSMUSG00220054176	lncRNA gene	Chr11:62614637-62622250 (-)
BALB/cJ	ENSMUSG00180053986	lncRNA gene	Chr11:62537244-62544848 (-)
C3H/HeJ	ENSMUSG00175054446	lncRNA gene	Chr11:62515320-62522926 (-)
C57BL/6NJ	ENSMUSG00215055125	lncRNA gene	Chr11:62298488-62306100 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005047094	lncRNA gene	Chr11:62073296-62081048 (-)
CBA/J	ENSMUSG00210054369	lncRNA gene	Chr11:62342618-62350226 (-)
DBA/2J	ENSMUSG00185056670	lncRNA gene	Chr11:62536776-62544384 (-)
FVB/NJ	ENSMUSG00205053982	lncRNA gene	Chr11:62434484-62442100 (-)
JF1/MsJ	ENSUMUG00000057281	lncRNA gene	Chr11:62947449-62955258 (-)
LP/J	ENSMUSG00230053928	lncRNA gene	Chr11:63675293-63682920 (-)
NOD/ShiLtJ	ENSMUSG00190054219	lncRNA gene	Chr11:62561100-62568719 (-)
NZO/HlLtJ	ENSMUSG00225047788	lncRNA gene	Chr11:65862788-65870415 (-)
PWK/PhJ	ENSLUMG00010053557	lncRNA gene	Chr11:62473855-62481662 (-)
SPRET/EiJ	ENSMSPG00010049205	lncRNA gene	Chr11:63172884-63180801 (-)
WSB/EiJ	ENSIUOG00005052828	lncRNA gene	Chr11:62484718-62492334 (-)

Homology

• Gene Tree
  Gm30786
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm30786
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  43
• RefSeq
  5

• Ensembl
  ENSMUSG00000120678 (Evidence)
• NCBI Gene
  102632808

Representative Sequences			Length	Strain/Species
genomic	102632808	NCBI Gene Model | MGI Sequence Detail	17950	C57BL/6J
transcript	XR_001780239	RefSeq | MGI Sequence Detail	2415	C57BL/6J

References

• Summaries
  All 6

  Phenotypes 3
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6

TSS for Gm30786:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr108484	Chr11:65540621-65540640 (-)	10,556 bp
Tssr108483	Chr11:65539221-65539253 (-)	11,950 bp