Gm30716 Gene Detail

Summary

• Symbol
  Gm30716
• Name
  predicted gene, 30716

• Feature Type
  lncRNA gene
• IDs
  MGI:5589875
  NCBI Gene: 102632720
• Alliance
  genome feature page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr14:78888329-78890606 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  201 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5589875	lncRNA gene	Chr14:78888329-78890841 (+)
129S1/SvImJ	ENSMUSG00200011095	lncRNA gene	Chr14:67341002-67343268 (+)
A/J	ENSMUSG00195004488	lncRNA gene	Chr14:67469771-67472037 (+)
AKR/J	ENSMUSG00220007397	lncRNA gene	Chr14:66846064-66848330 (+)
BALB/cJ	ENSMUSG00180024047	lncRNA gene	Chr14:67061479-67063745 (+)
C3H/HeJ	ENSMUSG00175030525	lncRNA gene	Chr14:68865945-68868211 (+)
C57BL/6NJ	ENSMUSG00215024631	lncRNA gene	Chr14:67055019-67057285 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005032668	lncRNA gene	Chr14:68734436-68736711 (+)
CBA/J	ENSMUSG00210010337	lncRNA gene	Chr14:67482210-67484476 (+)
DBA/2J	ENSMUSG00185009187	lncRNA gene	Chr14:72632629-72634855 (+)
FVB/NJ	ENSMUSG00205025596	lncRNA gene	Chr14:66885526-66887792 (+)
JF1/MsJ	ENSUMUG00000019240	lncRNA gene	Chr14:83784937-83787163 (+)
LP/J	ENSMUSG00230002826	lncRNA gene	Chr14:84677841-84680107 (+)
NOD/ShiLtJ	ENSMUSG00190010905	lncRNA gene	Chr14:67301335-67303601 (+)
NZO/HlLtJ	ENSMUSG00225025313	lncRNA gene	Chr14:74959100-74961366 (+)
PWK/PhJ	ENSLUMG00010010914	lncRNA gene	Chr14:66659458-66661724 (+)
SPRET/EiJ	ENSMSPG00010029466	lncRNA gene	Chr14:70361347-70363576 (+)
WSB/EiJ	ENSIUOG00005023360	lncRNA gene	Chr14:66644220-66646484 (+)

Homology

• Gene Tree
  Gm30716
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm30716
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  1

• Ensembl
  ENSMUSG00000120927 (Evidence)
• NCBI Gene
  102632720

Representative Sequences			Length	Strain/Species
genomic	102632720	NCBI Gene Model | MGI Sequence Detail	2278	C57BL/6J
transcript	KY467710	GenBank | ENA | DDBJ | MGI Sequence Detail	882	ZRU/MplStud

References

• Summaries
  All 5

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm30716:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr126769	Chr14:78888332-78888345 (+)	10 bp
Tssr126770	Chr14:78888369-78888378 (+)	45 bp