Gm30713 Gene Detail

Summary

• Symbol
  Gm30713
• Name
  predicted gene, 30713

• Feature Type
  lncRNA gene
• IDs
  MGI:5589872
  NCBI Gene: 102632717
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr8:126112623-126115581 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  224 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5589872	lncRNA gene	Chr8:126101709-126115588 (+)
129S1/SvImJ	ENSMUSG00200043880	lncRNA gene	Chr8:120366668-120369210 (+)
A/J	ENSMUSG00195027320	lncRNA gene	Chr8:120641430-120644026 (+)
AKR/J	ENSMUSG00220044651	lncRNA gene	Chr8:120836857-120839373 (+)
BALB/cJ	ENSMUSG00180029478	lncRNA gene	Chr8:120686286-120688886 (+)
C3H/HeJ	ENSMUSG00175032814	lncRNA gene	Chr8:120757730-120760330 (+)
C57BL/6NJ	ENSMUSG00215037166	lncRNA gene	Chr8:120345854-120348398 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005036207	lncRNA gene	Chr8:120087889-120090450 (+)
CBA/J	ENSMUSG00210039892	lncRNA gene	Chr8:120676984-120679526 (+)
DBA/2J	ENSMUSG00185038885	lncRNA gene	Chr8:126996009-126998551 (+)
FVB/NJ	ENSMUSG00205038501	lncRNA gene	Chr8:119644618-119647160 (+)
JF1/MsJ	ENSUMUG00000041254	lncRNA gene	Chr8:129194684-129197284 (+)
LP/J	ENSMUSG00230032061	lncRNA gene	Chr8:130549268-130551810 (+)
NOD/ShiLtJ	ENSMUSG00190021368	lncRNA gene	Chr8:120796683-120799201 (+)
NZO/HlLtJ	ENSMUSG00225019973	lncRNA gene	Chr8:133908745-133911287 (+)
PWK/PhJ	ENSLUMG00010040597	lncRNA gene	Chr8:120479087-120481690 (+)
SPRET/EiJ	ENSMSPG00010001791	lncRNA gene	Chr8:122656088-122658617 (+)
WSB/EiJ	ENSIUOG00005031937	lncRNA gene	Chr8:121461565-121464108 (+)

Homology

• Gene Tree
  Gm30713
  

Sequences &
Gene Models

• All Sequences
  34
• RefSeq
  2

• Ensembl
  ENSMUSG00000120810 (Evidence)
• NCBI Gene
  102632717

Representative Sequences			Length	Strain/Species
genomic	102632717	NCBI Gene Model | MGI Sequence Detail	2959	C57BL/6J
transcript	XR_879356	RefSeq | MGI Sequence Detail	1207	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm30713:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr80074	Chr8:126113031-126113049 (+)	417 bp