Gm30694 Pseudogene Detail

Summary

• Symbol
  Gm30694
• Name
  predicted gene, 30694

• Feature Type
  pseudogene
  BioType Conflict
  
• IDs
  MGI:5589853
  NCBI Gene: 102632688
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr1:156948525-156957555 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  332 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5589853	pseudogene	Chr1:156946518-156961969 (+)
129S1/SvImJ	ENSMUSG00200008075	pseudogene	Chr1:154392465-154407949 (+)
A/J	ENSMUSG00195022927	pseudogene	Chr1:153769123-153784576 (+)
AKR/J	ENSMUSG00220014791	pseudogene	Chr1:153561563-153577047 (+)
BALB/cJ	ENSMUSG00180037428	pseudogene	Chr1:153988442-154003245 (+)
C3H/HeJ	ENSMUSG00175043475	pseudogene	Chr1:154033431-154048914 (+)
C57BL/6NJ	ENSMUSG00215041452	pseudogene	Chr1:153933089-153948540 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005006039	pseudogene	Chr1:152582907-152598393 (+)
CBA/J	ENSMUSG00210021230	pseudogene	Chr1:153929775-153945259 (+)
DBA/2J	ENSMUSG00185047181	pseudogene	Chr1:158208553-158223356 (+)
FVB/NJ	ENSMUSG00205013259	pseudogene	Chr1:153063665-153079150 (+)
JF1/MsJ	ENSUMUG00000024047	pseudogene	Chr1:157365184-157379966 (+)
LP/J	ENSMUSG00230016963	pseudogene	Chr1:157791553-157807038 (+)
NOD/ShiLtJ	ENSMUSG00190041352	pseudogene	Chr1:153783340-153798827 (+)
NZO/HlLtJ	ENSMUSG00225006480	pseudogene	Chr1:161443864-161458667 (+)
PWK/PhJ	ENSLUMG00010042943	pseudogene	Chr1:152723610-152738383 (+)
SPRET/EiJ	ENSMSPG00010045669	pseudogene	Chr1:156071411-156086910 (+)
WSB/EiJ	ENSIUOG00005016135	pseudogene	Chr1:153373301-153388787 (+)

Homology

• Gene Tree
  Gm30694
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  2
• Genomic Mutations
  2 involving Gm30694
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000109913 (Evidence)
• NCBI Gene
  102632688

Representative Sequences			Length	Strain/Species
genomic	102632688	NCBI Gene Model | MGI Sequence Detail	9031	C57BL/6J
transcript	NR_165831	RefSeq | MGI Sequence Detail	9031	ZRU/MplStud

References

• Summaries
  All 5

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;