Gm30648 Gene Detail

Summary

• Symbol
  Gm30648
• Name
  predicted gene, 30648
• Synonyms
  Gm43194

• Feature Type
  lncRNA gene
• IDs
  MGI:5589807
  NCBI Gene: 102632621
• Alliance
  genome feature page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr3:133905837-133918995 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  481 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5589807	lncRNA gene	Chr3:133905664-133919006 (+)
129S1/SvImJ	ENSMUSG00200004244	lncRNA gene	Chr3:130683331-130696625 (+)
A/J	ENSMUSG00195008541	lncRNA gene	Chr3:130794959-130808256 (+)
AKR/J	ENSMUSG00220023388	lncRNA gene	Chr3:129235011-129248307 (+)
BALB/cJ	ENSMUSG00180003882	lncRNA gene	Chr3:130723776-130737069 (+)
C3H/HeJ	ENSMUSG00175014327	lncRNA gene	Chr3:130307426-130320720 (+)
C57BL/6NJ	ENSMUSG00215022138	lncRNA gene	Chr3:131062026-131075320 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0005745	lincRNA gene	Chr3:127561235-127571403 (+)
CAST/EiJ	ENSTCUG00005003866	lncRNA gene	Chr3:131421041-131423423 (-)
CBA/J	ENSMUSG00210004086	lncRNA gene	Chr3:130914677-130927970 (+)
DBA/2J	ENSMUSG00185027128	lncRNA gene	Chr3:131532691-131545979 (+)
FVB/NJ	ENSMUSG00205027700	lncRNA gene	Chr3:129845310-129858612 (+)
JF1/MsJ	ENSUMUG00000033027	lncRNA gene	Chr3:130290199-130292617 (-)
LP/J	ENSMUSG00230003655	lncRNA gene	Chr3:133501717-133515009 (+)
NOD/ShiLtJ	ENSMUSG00190001651	lncRNA gene	Chr3:131913051-131926335 (+)
NZO/HlLtJ	ENSMUSG00225005739	lncRNA gene	Chr3:135949707-135963010 (+)
PWK/PhJ	ENSLUMG00010015609	lncRNA gene	Chr3:130261587-130263963 (-)
SPRET/EiJ	ENSMSPG00010013283	lncRNA gene	Chr3:131340989-131354907 (+)
WSB/EiJ	ENSIUOG00005017471	lncRNA gene	Chr3:131051530-131064812 (+)

Homology

• Gene Tree
  Gm30648
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm30648
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  31
• RefSeq
  2

• Ensembl
  ENSMUSG00000106139 (Evidence)
• NCBI Gene
  102632621

Representative Sequences			Length	Strain/Species
genomic	102632621	NCBI Gene Model | MGI Sequence Detail	13159	C57BL/6J
transcript	NR_166459	RefSeq | MGI Sequence Detail	1963	ZRU/MplStud

Molecular
Reagents

• All nucleic 1

  cDNA 1

Other
Accession IDs

MGI:5663331

References

• Summaries
  All 9

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Gm30648:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr31784	Chr3:133905825-133905851 (+)	1 bp
Tssr31785	Chr3:133905903-133905913 (+)	71 bp