Gm30613 Gene Detail

Summary

• Symbol
  Gm30613
• Name
  predicted gene, 30613

• Feature Type
  lncRNA gene
• IDs
  MGI:5589772
  NCBI Gene: 108168719
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr5:15780330-15810117 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  205 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5589772	lncRNA gene	Chr5:15743000-15817397 (-)
129S1/SvImJ	ENSMUSG00200011667	lncRNA gene	Chr5:11281394-11335791 (-)
A/J	ENSMUSG00195040485	lncRNA gene	Chr5:10842828-10897262 (-)
AKR/J	ENSMUSG00220039819	lncRNA gene	Chr5:10877108-10935621 (+)
BALB/cJ	ENSMUSG00180026037	lncRNA gene	Chr5:10718247-10767228 (-)
C3H/HeJ	no annotation
C57BL/6NJ	ENSMUSG00215024904	lncRNA gene	Chr5:11267850-11350659 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005003595	lncRNA gene	Chr5:11206102-11229604 (+)
CBA/J	no annotation
DBA/2J	ENSMUSG00185017317	lncRNA gene	Chr5:13203320-13270486 (-)
FVB/NJ	no annotation
JF1/MsJ	ENSUMUG00000002958	lncRNA gene	Chr5:16029285-16064666 (+)
JF1/MsJ	ENSUMUG00000002970	lncRNA gene	Chr5:16222291-16288563 (+)
JF1/MsJ	ENSUMUG00000002944	lncRNA gene	Chr5:12539817-12599454 (+)
JF1/MsJ	ENSUMUG00000002981	lncRNA gene	Chr5:17355811-17446552 (+)
LP/J	ENSMUSG00230003776	lncRNA gene	Chr5:17699067-17765941 (-)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	ENSMUSG00225010208	lncRNA gene	Chr5:21382916-21481087 (+)
NZO/HlLtJ	ENSMUSG00225010325	lncRNA gene	Chr5:22664575-22701959 (+)
NZO/HlLtJ	ENSMUSG00225009958	lncRNA gene	Chr5:23068016-23135080 (-)
NZO/HlLtJ	ENSMUSG00225010254	lncRNA gene	Chr5:21978153-22015523 (+)
NZO/HlLtJ	ENSMUSG00225010248	lncRNA gene	Chr5:21783129-21850206 (-)
PWK/PhJ	ENSLUMG00010036471	lncRNA gene	Chr5:11011493-11066532 (+)
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm30613
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Spontaneous
  1
• Genomic Mutations
  1 involving Gm30613
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  26
• RefSeq
  1

• Ensembl
  ENSMUSG00000105300 (Evidence)
• NCBI Gene
  108168719

Representative Sequences			Length	Strain/Species
genomic	108168719	NCBI Gene Model | MGI Sequence Detail	29788	C57BL/6J
transcript	XR_003953466	RefSeq | MGI Sequence Detail	779	C57BL/6J

References

• Summaries
  All 6

  Phenotypes 3
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;