Gm30605 Gene Detail

Summary

• Symbol
  Gm30605
• Name
  predicted gene, 30605

• Feature Type
  lncRNA gene
• IDs
  MGI:5589764
  NCBI Gene: 102632566
• Alliance
  genome feature page
• Transcription Start Sites
  10 TSS

Location &
Maps

• Sequence Map
  Chr8:81039702-81121814 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  1651 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5589764	lncRNA gene	Chr8:81039679-81121874 (-)
129S1/SvImJ	ENSMUSG00200026663	lncRNA gene	Chr8:75414269-75484714 (-)
A/J	ENSMUSG00195018017	lncRNA gene	Chr8:75765440-75832020 (-)
AKR/J	ENSMUSG00220024402	lncRNA gene	Chr8:75857193-75923783 (-)
BALB/cJ	ENSMUSG00180021535	lncRNA gene	Chr8:75616495-75683078 (-)
C3H/HeJ	ENSMUSG00175011262	lncRNA gene	Chr8:75695639-75762220 (-)
C57BL/6NJ	ENSMUSG00215026892	lncRNA gene	Chr8:75332203-75398798 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005037670	lncRNA gene	Chr8:75262109-75321397 (-)
CBA/J	ENSMUSG00210020342	lncRNA gene	Chr8:75687716-75754300 (-)
DBA/2J	ENSMUSG00185038554	lncRNA gene	Chr8:81796893-81863480 (-)
FVB/NJ	ENSMUSG00205043460	lncRNA gene	Chr8:74781181-74840402 (-)
JF1/MsJ	ENSUMUG00000039776	lncRNA gene	Chr8:84134057-84193230 (-)
LP/J	ENSMUSG00230029502	lncRNA gene	Chr8:85415132-85481711 (-)
NOD/ShiLtJ	ENSMUSG00190030238	lncRNA gene	Chr8:75754019-75814054 (-)
NZO/HlLtJ	ENSMUSG00225023228	lncRNA gene	Chr8:88816252-88876294 (-)
PWK/PhJ	ENSLUMG00010030107	lncRNA gene	Chr8:75544230-75603471 (-)
SPRET/EiJ	ENSMSPG00010025252	lncRNA gene	Chr8:77320033-77381628 (-)
WSB/EiJ	ENSIUOG00005016446	lncRNA gene	Chr8:76518958-76578209 (-)

Homology

• Gene Tree
  Gm30605
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm30605
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  44
• RefSeq
  1

• Ensembl
  ENSMUSG00000120731 (Evidence)
• NCBI Gene
  102632566

Representative Sequences			Length	Strain/Species
genomic	102632566	NCBI Gene Model | MGI Sequence Detail	82113	C57BL/6J
transcript	NR_168035	RefSeq | MGI Sequence Detail	5167	ZRU/MplStud

References

• Summaries
  All 5

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm30605:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr81903	Chr8:81121866-81121869 (-)	-54 bp
Tssr81902	Chr8:81121843-81121857 (-)	-36 bp
Tssr81901	Chr8:81121829-81121834 (-)	-18 bp
Tssr81900	Chr8:81121806-81121821 (-)	0 bp
Tssr81899	Chr8:81121781-81121794 (-)	26 bp
Tssr81898	Chr8:81121758-81121763 (-)	53 bp
Tssr81897	Chr8:81121743-81121748 (-)	68 bp
Tssr81896	Chr8:81121731-81121738 (-)	79 bp
Tssr81895	Chr8:81121686-81121691 (-)	125 bp
Tssr81894	Chr8:81118931-81118935 (-)	2,881 bp