Gm30600 Gene Detail

Summary

• Symbol
  Gm30600
• Name
  predicted gene, 30600

• Feature Type
  lncRNA gene
• IDs
  MGI:5589759
  NCBI Gene: 102632558
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:37423846-37433387 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  368 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5589759	lncRNA gene	Chr13:37340094-37433387 (-)
129S1/SvImJ	ENSMUSG00200013897	lncRNA gene	Chr13:34644607-34651865 (-)
A/J	ENSMUSG00195034295	lncRNA gene	Chr13:33731168-33738449 (-)
AKR/J	ENSMUSG00220035100	lncRNA gene	Chr13:33501792-33509073 (-)
BALB/cJ	ENSMUSG00180008220	lncRNA gene	Chr13:34036768-34044051 (-)
C3H/HeJ	ENSMUSG00175015057	lncRNA gene	Chr13:33989467-33996748 (-)
C57BL/6NJ	ENSMUSG00215015309	lncRNA gene	Chr13:34153818-34161076 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005038285	lncRNA gene	Chr13:34078763-34090363 (-)
CBA/J	ENSMUSG00210011984	lncRNA gene	Chr13:33997149-34004430 (-)
DBA/2J	ENSMUSG00185034691	lncRNA gene	Chr13:34809541-34816797 (-)
FVB/NJ	ENSMUSG00205031961	lncRNA gene	Chr13:33679968-33687226 (-)
JF1/MsJ	ENSUMUG00000038350	lncRNA gene	Chr13:34378183-34385681 (-)
LP/J	ENSMUSG00230016141	lncRNA gene	Chr13:44140152-44147433 (-)
NOD/ShiLtJ	ENSMUSG00190012061	lncRNA gene	Chr13:34205596-34212854 (-)
NZO/HlLtJ	ENSMUSG00225034790	lncRNA gene	Chr13:37928080-37935361 (-)
PWK/PhJ	ENSLUMG00010029167	lncRNA gene	Chr13:33214061-33221349 (-)
SPRET/EiJ	ENSMSPG00010011351	lncRNA gene	Chr13:33220737-33229241 (-)
WSB/EiJ	ENSIUOG00005028341	lncRNA gene	Chr13:33346128-33353401 (-)

Homology

• Gene Tree
  Gm30600
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm30600
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  65
• RefSeq
  1

• Ensembl
  ENSMUSG00000114297 (Evidence)
• NCBI Gene
  102632558

Representative Sequences			Length	Strain/Species
genomic	102632558	NCBI Gene Model | MGI Sequence Detail	9542	C57BL/6J
transcript	XR_873247	RefSeq | MGI Sequence Detail	924	C57BL/6J

References

• Summaries
  All 6

  Phenotypes 3
• Earliest
  J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69