Gm30563 Gene Detail

Summary

• Symbol
  Gm30563
• Name
  predicted gene, 30563

• Feature Type
  lncRNA gene
• IDs
  MGI:5589722
  NCBI Gene: 102632507
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr15:64258192-64308733 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  1901 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5589722	lncRNA gene	Chr15:64254998-64308733 (+)
129S1/SvImJ	ENSMUSG00200020029	lncRNA gene	Chr15:61301053-61338290 (+)
A/J	ENSMUSG00195028759	lncRNA gene	Chr15:61405313-61442667 (+)
AKR/J	ENSMUSG00220021802	lncRNA gene	Chr15:61248474-61285839 (+)
BALB/cJ	ENSMUSG00180023736	lncRNA gene	Chr15:61240205-61277620 (+)
C3H/HeJ	ENSMUSG00175005277	lncRNA gene	Chr15:61565241-61602649 (+)
C57BL/6NJ	ENSMUSG00215006107	lncRNA gene	Chr15:61251949-61289176 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005020295	lncRNA gene	Chr15:61050252-61087334 (+)
CBA/J	ENSMUSG00210025395	lncRNA gene	Chr15:61363229-61400643 (+)
DBA/2J	ENSMUSG00185025325	lncRNA gene	Chr15:61292133-61329366 (+)
FVB/NJ	ENSMUSG00205011272	lncRNA gene	Chr15:61050851-61088085 (+)
JF1/MsJ	ENSUMUG00000017922	lncRNA gene	Chr15:61037572-61078000 (+)
LP/J	ENSMUSG00230025561	lncRNA gene	Chr15:64627724-64664944 (+)
NOD/ShiLtJ	ENSMUSG00190004604	lncRNA gene	Chr15:61340470-61377695 (+)
NZO/HlLtJ	ENSMUSG00225027303	lncRNA gene	Chr15:64910315-64947533 (+)
PWK/PhJ	ENSLUMG00010011322	lncRNA gene	Chr15:61346167-61386486 (+)
SPRET/EiJ	ENSMSPG00010004458	lncRNA gene	Chr15:62644441-62682410 (+)
WSB/EiJ	ENSIUOG00005021412	lncRNA gene	Chr15:61355336-61392664 (+)

Homology

• Gene Tree
  Gm30563
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  2
• Genomic Mutations
  2 involving Gm30563
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  26
• RefSeq
  3

• Ensembl
  ENSMUSG00000115169 (Evidence)
• NCBI Gene
  102632507

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000115169	Ensembl Gene Model | MGI Sequence Detail	50542	C57BL/6J
transcript	ENSMUST00000226656	Ensembl | MGI Sequence Detail	2198	Not Applicable

References

• Summaries
  All 6

  Phenotypes 3
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17