Gm30420 Gene Detail

Summary

• Symbol
  Gm30420
• Name
  predicted gene, 30420

• Feature Type
  lncRNA gene
• IDs
  MGI:5589579
  NCBI Gene: 102632312
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr17:73327315-73331144 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  237 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5589579	lncRNA gene	Chr17:73326443-73339526 (-)
129S1/SvImJ	ENSMUSG00200039194	lncRNA gene	Chr17:68617698-68626565 (-)
A/J	ENSMUSG00195019095	lncRNA gene	Chr17:70015823-70024618 (-)
AKR/J	ENSMUSG00220018643	lncRNA gene	Chr17:69061098-69069894 (-)
BALB/cJ	ENSMUSG00180022201	lncRNA gene	Chr17:69749037-69757789 (-)
C3H/HeJ	ENSMUSG00175030955	lncRNA gene	Chr17:69008714-69017450 (-)
C57BL/6NJ	ENSMUSG00215033552	lncRNA gene	Chr17:68745545-68754355 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005027163	lncRNA gene	Chr17:69565118-69573991 (-)
CBA/J	ENSMUSG00210031072	lncRNA gene	Chr17:68878503-68887239 (-)
DBA/2J	ENSMUSG00185013259	lncRNA gene	Chr17:71711539-71720270 (-)
FVB/NJ	ENSMUSG00205018341	lncRNA gene	Chr17:69514081-69522822 (-)
JF1/MsJ	ENSUMUG00000039053	lncRNA gene	Chr17:71352232-71362637 (-)
LP/J	ENSMUSG00230022599	lncRNA gene	Chr17:72674890-72683763 (-)
NOD/ShiLtJ	ENSMUSG00190038060	lncRNA gene	Chr17:68764791-68773609 (-)
NZO/HlLtJ	ENSMUSG00225029025	lncRNA gene	Chr17:74958466-74967294 (-)
PWK/PhJ	ENSLUMG00010030990	lncRNA gene	Chr17:68585231-68595651 (-)
SPRET/EiJ	ENSMSPG00010017311	lncRNA gene	Chr17:68931582-68940424 (-)
WSB/EiJ	ENSIUOG00005032795	lncRNA gene	Chr17:69730342-69739205 (-)

Homology

• Gene Tree
  Gm30420
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  44
• RefSeq
  1

• Ensembl
  ENSMUSG00000117096 (Evidence)
• NCBI Gene
  102632312

Representative Sequences			Length	Strain/Species
genomic	102632312	NCBI Gene Model | MGI Sequence Detail	3830	C57BL/6J
transcript	XR_385745	RefSeq | MGI Sequence Detail	3166	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;