Gm30414 Gene Detail

Summary

• Symbol
  Gm30414
• Name
  predicted gene, 30414

• Feature Type
  lncRNA gene
• IDs
  MGI:5589573
  NCBI Gene: 102632303
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:7568192-7588373 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  30 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5589573	lncRNA gene	Chr1:7568192-7588373 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0004770	lincRNA gene	Chr1:4753868-4776386 (+)
A/J	MGP_AJ_G0004751	lincRNA gene	Chr1:4773347-4794715 (+)
AKR/J	MGP_AKRJ_G0004730	lincRNA gene	Chr1:4652893-4676813 (+)
BALB/cJ	MGP_BALBcJ_G0004733	lincRNA gene	Chr1:4550033-4573135 (+)
C3H/HeJ	MGP_C3HHeJ_G0004681	lincRNA gene	Chr1:4649193-4671846 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0004883	lincRNA gene	Chr1:4898165-4921780 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0004319	lincRNA gene	Chr1:3963306-3996515 (+)
CAST/EiJ	MGP_CASTEiJ_G0004638	lincRNA gene	Chr1:4826679-4850195 (+)
CBA/J	MGP_CBAJ_G0004674	lincRNA gene	Chr1:5100505-5125056 (+)
DBA/2J	MGP_DBA2J_G0004692	lincRNA gene	Chr1:4486494-4507575 (+)
FVB/NJ	MGP_FVBNJ_G0004712	lincRNA gene	Chr1:4434095-4454989 (+)
LP/J	MGP_LPJ_G0004771	lincRNA gene	Chr1:4849700-4871626 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0004697	lincRNA gene	Chr1:5394536-5421155 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0004887	lincRNA gene	Chr1:4603363-4627417 (+)
PWK/PhJ	MGP_PWKPhJ_G0004590	lincRNA gene	Chr1:4340415-4361466 (+)
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0004679	lincRNA gene	Chr1:4571421-4593163 (+)

Homology

• Gene Tree
  Gm30414
  

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• UniProt
  1

• Ensembl
  ENSMUSG00000103067 (Evidence)
• NCBI Gene
  102632303

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000103067	Ensembl Gene Model | MGI Sequence Detail	20182	C57BL/6J
transcript	ENSMUST00000194886	Ensembl | MGI Sequence Detail	2596	Not Applicable
polypeptide	Q8CB38	UniProt | EBI | MGI Sequence Detail	100	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 5
• Earliest
  J:53168 Bairoch A, et al., SWISS-PROT Annotated protein sequence database. Database Release. 1999;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;