Gm30371 Gene Detail

Summary

• Symbol
  Gm30371
• Name
  predicted gene, 30371

• Feature Type
  lncRNA gene
• IDs
  MGI:5589530
  NCBI Gene: 102632238
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr16:8779165-8787764 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  421 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5589530	lncRNA gene	Chr16:8762756-8787764 (+)
129S1/SvImJ	ENSMUSG00200012135	lncRNA gene	Chr16:5747571-5772585 (+)
A/J	ENSMUSG00195011985	lncRNA gene	Chr16:5304555-5329565 (+)
AKR/J	ENSMUSG00220017325	lncRNA gene	Chr16:5593315-5618320 (+)
BALB/cJ	ENSMUSG00180009043	lncRNA gene	Chr16:5546205-5571206 (+)
C3H/HeJ	ENSMUSG00175031224	lncRNA gene	Chr16:5737315-5762310 (+)
C57BL/6NJ	ENSMUSG00215026064	lncRNA gene	Chr16:5411413-5436403 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005031676	lncRNA gene	Chr16:5644792-5668424 (+)
CBA/J	ENSMUSG00210012125	lncRNA gene	Chr16:5754530-5779525 (+)
DBA/2J	ENSMUSG00185010193	lncRNA gene	Chr16:5699788-5724787 (+)
FVB/NJ	ENSMUSG00205013618	lncRNA gene	Chr16:5618147-5643138 (+)
JF1/MsJ	ENSUMUG00000038843	lncRNA gene	Chr16:5783920-5808735 (+)
LP/J	ENSMUSG00230012200	lncRNA gene	Chr16:8246199-8271217 (+)
NOD/ShiLtJ	ENSMUSG00190025741	lncRNA gene	Chr16:5791056-5816049 (+)
NZO/HlLtJ	ENSMUSG00225032468	lncRNA gene	Chr16:11482920-11507915 (+)
PWK/PhJ	ENSLUMG00010018336	lncRNA gene	Chr16:5617358-5641920 (+)
SPRET/EiJ	ENSMSPG00010017627	lncRNA gene	Chr16:5600386-5625152 (+)
WSB/EiJ	ENSIUOG00005016829	lncRNA gene	Chr16:5728718-5753720 (+)

Homology

• Gene Tree
  Gm30371
  

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  1

• Ensembl
  ENSMUSG00000116525 (Evidence)
• NCBI Gene
  102632238

Representative Sequences			Length	Strain/Species
genomic	102632238	NCBI Gene Model | MGI Sequence Detail	8600	C57BL/6J
transcript	BC072646	GenBank | ENA | DDBJ | MGI Sequence Detail	4445	C57BL/6

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 4
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;