Gm30288 Gene Detail

Summary

• Symbol
  Gm30288
• Name
  predicted gene, 30288

• Feature Type
  lncRNA gene
• IDs
  MGI:5589447
  NCBI Gene: 102632134
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr18:81478148-81500820 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  744 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5589447	lncRNA gene	Chr18:81477388-81501114 (-)
129S1/SvImJ	ENSMUSG00200030601	lncRNA gene	Chr18:78686142-78709866 (-)
A/J	ENSMUSG00195005185	lncRNA gene	Chr18:78787335-78811056 (-)
AKR/J	ENSMUSG00220017790	lncRNA gene	Chr18:78712517-78736232 (-)
BALB/cJ	ENSMUSG00180013516	lncRNA gene	Chr18:79357632-79381350 (-)
C3H/HeJ	ENSMUSG00175012767	lncRNA gene	Chr18:78897992-78921708 (-)
C57BL/6NJ	ENSMUSG00215029109	lncRNA gene	Chr18:78260222-78283937 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005028813	lncRNA gene	Chr18:77811786-77835649 (-)
CBA/J	ENSMUSG00210035188	lncRNA gene	Chr18:78848492-78872205 (-)
DBA/2J	ENSMUSG00185012141	lncRNA gene	Chr18:78753763-78777483 (-)
FVB/NJ	ENSMUSG00205017218	lncRNA gene	Chr18:78161735-78185454 (-)
JF1/MsJ	ENSUMUG00000035682	lncRNA gene	Chr18:78647940-78671802 (-)
LP/J	ENSMUSG00230013764	lncRNA gene	Chr18:80792369-80816092 (-)
NOD/ShiLtJ	ENSMUSG00190023548	lncRNA gene	Chr18:78561168-78584888 (-)
NZO/HlLtJ	ENSMUSG00225034470	lncRNA gene	Chr18:80670029-80693745 (-)
PWK/PhJ	ENSLUMG00010007213	lncRNA gene	Chr18:79039986-79063910 (-)
SPRET/EiJ	ENSMSPG00010009116	lncRNA gene	Chr18:79408039-79431941 (-)
WSB/EiJ	ENSIUOG00005007817	lncRNA gene	Chr18:78213086-78237005 (-)

Homology

• Gene Tree
  Gm30288
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Transposon induced
  1
• Genomic Mutations
  1 involving Gm30288
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  40
• RefSeq
  3

• Ensembl
  ENSMUSG00000118227 (Evidence)
• NCBI Gene
  102632134

Representative Sequences			Length	Strain/Species
genomic	102632134	NCBI Gene Model | MGI Sequence Detail	22673	C57BL/6J
transcript	XR_877610	RefSeq | MGI Sequence Detail	568	C57BL/6J

References

• Summaries
  All 4

  Phenotypes 1
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:175597 Overbeek PA, Direct Data Submission for Overbeek Lentiviral Transgenic Lines. MGI Direct Data Submission. 2011;