Gm30285 Pseudogene Detail

Summary

• Symbol
  Gm30285
• Name
  predicted gene, 30285

• Feature Type
  pseudogene
• IDs
  MGI:5589444
  NCBI Gene: 102632131
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:20168531-20168952 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  121 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5589444	pseudogene	Chr10:20168531-20168955 (+)
129S1/SvImJ	ENSMUSG00200011201	pseudogene	Chr10:17160441-17160862 (+)
A/J	ENSMUSG00195006852	pseudogene	Chr10:17172490-17172911 (+)
AKR/J	ENSMUSG00220010169	pseudogene	Chr10:17081579-17082000 (+)
BALB/cJ	ENSMUSG00180015290	pseudogene	Chr10:17296710-17297131 (+)
C3H/HeJ	ENSMUSG00175020705	pseudogene	Chr10:17316531-17316952 (+)
C57BL/6NJ	ENSMUSG00215003880	pseudogene	Chr10:17123290-17123711 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005030976	pseudogene	Chr10:17088233-17088655 (+)
CBA/J	ENSMUSG00210015941	pseudogene	Chr10:17253335-17253756 (+)
DBA/2J	ENSMUSG00185008352	pseudogene	Chr10:17238675-17239096 (+)
FVB/NJ	ENSMUSG00205018854	pseudogene	Chr10:17162138-17162558 (+)
JF1/MsJ	ENSUMUG00000015424	pseudogene	Chr10:17292150-17292573 (+)
LP/J	ENSMUSG00230018508	pseudogene	Chr10:18894574-18894995 (+)
NOD/ShiLtJ	ENSMUSG00190010995	pseudogene	Chr10:17233905-17234325 (+)
NZO/HlLtJ	ENSMUSG00225030354	pseudogene	Chr10:23379371-23379792 (+)
PWK/PhJ	ENSLUMG00010015631	pseudogene	Chr10:17055227-17055647 (+)
SPRET/EiJ	ENSMSPG00010011551	pseudogene	Chr10:17691150-17691567 (+)
WSB/EiJ	ENSIUOG00005024621	pseudogene	Chr10:16861112-16861534 (+)

Homology

• Gene Tree
  Gm30285
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm30285
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000111064 (Evidence)
• NCBI Gene
  102632131

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000111064	Ensembl Gene Model | MGI Sequence Detail	422	C57BL/6J
transcript	ENSMUST00000214614	Ensembl | MGI Sequence Detail	422	Not Applicable

References

• Summaries
  All 8

  Phenotypes 5
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:74548 Benson KF, et al., Molecular Characterization of the Mouse In(10)17Rk Inversion and Identification of a Novel Muscle-Specific Gene at the Proximal Breakpoint. Genetics. 2002 Jan;160(1):279-87