Gm30198 Gene Detail

Summary

• Symbol
  Gm30198
• Name
  predicted gene, 30198

• Feature Type
  lncRNA gene
• IDs
  MGI:5589357
  NCBI Gene: 102632020
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:102413430-102433955 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  804 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5589357	lncRNA gene	Chr12:102413430-102434135 (+)
129S1/SvImJ	ENSMUSG00200029257	lncRNA gene	Chr12:94213918-94234228 (+)
A/J	ENSMUSG00195021263	lncRNA gene	Chr12:96733727-96753954 (+)
AKR/J	ENSMUSG00220044147	lncRNA gene	Chr12:94680229-94700494 (+)
BALB/cJ	ENSMUSG00180037669	lncRNA gene	Chr12:95926253-95946502 (+)
C3H/HeJ	ENSMUSG00175035822	lncRNA gene	Chr12:98546619-98566826 (+)
C57BL/6NJ	ENSMUSG00215041012	lncRNA gene	Chr12:95214922-95235227 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005020641	lncRNA gene	Chr12:94593977-94614592 (+)
CBA/J	ENSMUSG00210014770	lncRNA gene	Chr12:95587329-95607664 (+)
DBA/2J	ENSMUSG00185047907	lncRNA gene	Chr12:97386695-97406900 (+)
FVB/NJ	ENSMUSG00205022393	lncRNA gene	Chr12:94605441-94625739 (+)
JF1/MsJ	ENSUMUG00000025711	lncRNA gene	Chr12:102126476-102148079 (+)
LP/J	ENSMUSG00230031166	lncRNA gene	Chr12:104478917-104499227 (+)
NOD/ShiLtJ	ENSMUSG00190034653	lncRNA gene	Chr12:90537906-90558160 (-)
NZO/HlLtJ	ENSMUSG00225039103	lncRNA gene	Chr12:106190821-106211073 (+)
PWK/PhJ	ENSLUMG00010014475	lncRNA gene	Chr12:95566971-95588530 (+)
SPRET/EiJ	ENSMSPG00010020146	lncRNA gene	Chr12:98074260-98095012 (+)
WSB/EiJ	ENSIUOG00005010264	lncRNA gene	Chr12:94612823-94633016 (+)

Homology

• Gene Tree
  Gm30198
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm30198
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  3

• Ensembl
  ENSMUSG00000113265 (Evidence)
• NCBI Gene
  102632020

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000113265	Ensembl Gene Model | MGI Sequence Detail	20526	C57BL/6J
transcript	ENSMUST00000222873	Ensembl | MGI Sequence Detail	1068	Not Applicable

References

• Summaries
  All 5

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;